RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 CPA1P15085 419 aa16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
CACNA1C-231ENST00000616390 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
CACNA1C-231ENST00000616390 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
CACNA1C-231ENST00000616390 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
CACNA1C-231ENST00000616390 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
CACNA1C-231ENST00000616390 CCDC8Q9H0W5 538 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-231ENST00000616390 AACSQ86V21 672 aa16.81■□□□□ 0.28
CACNA1C-231ENST00000616390 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
CACNA1C-231ENST00000616390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-231ENST00000616390 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
CACNA1C-231ENST00000616390 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
CACNA1C-231ENST00000616390 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
CACNA1C-231ENST00000616390 CLEC17AQ6ZS10 378 aa16.8■□□□□ 0.28
CACNA1C-231ENST00000616390 ERBB3P21860 1342 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 SGSM2O43147 1006 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 ATF3P18847 181 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 HSPA4P34932 840 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 GPT2Q8TD30 523 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 LMO7Q8WWI1 1683 aa16.79■□□□□ 0.28
CACNA1C-231ENST00000616390 ZNF790Q6PG37 636 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 AOX1Q06278 1338 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 MED1Q15648 1581 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 GRM8O00222 908 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 GTF2E1P29083 439 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 MCM2P49736 904 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 ANAPC15P60006 121 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 ZSCAN23Q3MJ62 389 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
CACNA1C-231ENST00000616390 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 MYD88Q99836 296 aa16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
CACNA1C-231ENST00000616390 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-231ENST00000616390 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 PTH1RQ03431 593 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 KAZALD1Q96I82 304 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 LSG1Q9H089 658 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 PDIA6Q15084 440 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 ZNF496Q96IT1 587 aaPredicted RBP16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 BOLA2Q9H3K6 86 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 RAD50Q92878 1312 aa16.76■□□□□ 0.27
CACNA1C-231ENST00000616390 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 TCHHQ07283 1943 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 KCNJ4P48050 445 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
CACNA1C-231ENST00000616390 SASH1O94885 1247 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 AK2P54819 239 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 CUL4AQ13619 759 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 SYCE3A1L190 88 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 PHKG2P15735 406 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 FAM227BQ96M60 508 aa16.74■□□□□ 0.27
CACNA1C-231ENST00000616390 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 BRD1O95696 1058 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 CHRM1P11229 460 aaPredicted RBP16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 EPHA10Q5JZY3 1008 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 TMEM63CQ9P1W3 806 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 TTC41PQ6P2S7 1318 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 MTX1Q13505 466 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 SECISBP2LQ93073 1101 aaKnown RBP16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
CACNA1C-231ENST00000616390 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 SLIT3O75094 1523 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 NCAPD2Q15021 1401 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms