RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
SSBP2-220ENST00000615665 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
SSBP2-220ENST00000615665 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
SSBP2-220ENST00000615665 USP32Q8NFA0 1604 aa16.69■□□□□ 0.26
SSBP2-220ENST00000615665 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
SSBP2-220ENST00000615665 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
SSBP2-220ENST00000615665 JARID2Q92833 1246 aaPredicted RBP16.68■□□□□ 0.26
SSBP2-220ENST00000615665 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
SSBP2-220ENST00000615665 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
SSBP2-220ENST00000615665 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSBP2-220ENST00000615665 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
SSBP2-220ENST00000615665 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
SSBP2-220ENST00000615665 AOX1Q06278 1338 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSBP2-220ENST00000615665 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SSBP2-220ENST00000615665 ZSCAN23Q3MJ62 389 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 TRIM29Q14134 588 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
SSBP2-220ENST00000615665 STX6O43752 255 aa16.66■□□□□ 0.26
SSBP2-220ENST00000615665 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
SSBP2-220ENST00000615665 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
SSBP2-220ENST00000615665 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
SSBP2-220ENST00000615665 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
SSBP2-220ENST00000615665 CABLES1Q8TDN4 633 aa16.65■□□□□ 0.26
SSBP2-220ENST00000615665 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
SSBP2-220ENST00000615665 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
SSBP2-220ENST00000615665 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
SSBP2-220ENST00000615665 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
SSBP2-220ENST00000615665 GJB2P29033 226 aa16.64■□□□□ 0.26
SSBP2-220ENST00000615665 SSH3Q8TE77 659 aa16.64■□□□□ 0.26
SSBP2-220ENST00000615665 INTS4Q96HW7 963 aaKnown RBP16.64■□□□□ 0.26
SSBP2-220ENST00000615665 SPATA32Q96LK8 384 aa16.64■□□□□ 0.26
SSBP2-220ENST00000615665 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.26
SSBP2-220ENST00000615665 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
SSBP2-220ENST00000615665 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
SSBP2-220ENST00000615665 KCNQ3O43525 872 aa16.64■□□□□ 0.25
SSBP2-220ENST00000615665 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
SSBP2-220ENST00000615665 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.258e-7■■■■■ 37.5
SSBP2-220ENST00000615665 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
SSBP2-220ENST00000615665 CPS1P31327 1500 aa16.64■□□□□ 0.25
SSBP2-220ENST00000615665 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
SSBP2-220ENST00000615665 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
SSBP2-220ENST00000615665 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.25
SSBP2-220ENST00000615665 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
SSBP2-220ENST00000615665 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
SSBP2-220ENST00000615665 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
SSBP2-220ENST00000615665 STARD3NLO95772 234 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 ZNF396Q96N95 335 aaPredicted RBP16.62■□□□□ 0.25
SSBP2-220ENST00000615665 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
SSBP2-220ENST00000615665 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
SSBP2-220ENST00000615665 DCAF5Q96JK2 942 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
SSBP2-220ENST00000615665 OSBPL3Q9H4L5 887 aa16.62■□□□□ 0.25
SSBP2-220ENST00000615665 KINO60870 393 aaKnown RBP16.61■□□□□ 0.25
SSBP2-220ENST00000615665 AK2P54819 239 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
SSBP2-220ENST00000615665 NMIQ13287 307 aaPredicted RBP16.61■□□□□ 0.25
SSBP2-220ENST00000615665 SGSM2O43147 1006 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 VPS37DQ86XT2 251 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 MPNDQ8N594 471 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
SSBP2-220ENST00000615665 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 IFT172Q9UG01 1749 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 ERICH2A1L162 156 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 GOLIM4O00461 696 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
SSBP2-220ENST00000615665 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
SSBP2-220ENST00000615665 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 LMBR1LQ6UX01 489 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 TPM3P06753 285 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 ZSCAN25Q6NSZ9 544 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
SSBP2-220ENST00000615665 HMGB1P09429 215 aaKnown RBP16.59■□□□□ 0.25
SSBP2-220ENST00000615665 METTL24Q5JXM2 366 aa16.59■□□□□ 0.25
SSBP2-220ENST00000615665 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
SSBP2-220ENST00000615665 RAD50Q92878 1312 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms