RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 ECE1P42892 770 aa9.62□□□□□ -0.87
MUC1-227ENST00000615517 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
MUC1-227ENST00000615517 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
MUC1-227ENST00000615517 PNMA8AQ86V59 439 aaPredicted RBP9.62□□□□□ -0.87
MUC1-227ENST00000615517 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
MUC1-227ENST00000615517 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
MUC1-227ENST00000615517 ZBTB1Q9Y2K1 713 aa9.62□□□□□ -0.87
MUC1-227ENST00000615517 UBR2Q8IWV8 1755 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 AKAP11Q9UKA4 1901 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 PDE6BP35913 854 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 MAP2K2P36507 400 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
MUC1-227ENST00000615517 ZNF530Q6P9A1 599 aaPredicted RBP9.61□□□□□ -0.87
MUC1-227ENST00000615517 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 TLL2Q9Y6L7 1015 aa9.61□□□□□ -0.87
MUC1-227ENST00000615517 BCORQ6W2J9 1755 aa9.6□□□□□ -0.87
MUC1-227ENST00000615517 TRAF5O00463 557 aa9.6□□□□□ -0.87
MUC1-227ENST00000615517 MTHFSP49914 203 aa9.6□□□□□ -0.87
MUC1-227ENST00000615517 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
MUC1-227ENST00000615517 ZNF277Q9NRM2 450 aaPredicted RBP9.6□□□□□ -0.87
MUC1-227ENST00000615517 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
MUC1-227ENST00000615517 POLR2AP24928 1970 aaKnown RBP9.59□□□□□ -0.87
MUC1-227ENST00000615517 COL4A5P29400 1685 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 FZD9O00144 591 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 CA12O43570 354 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 SRGNP10124 158 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 STYK1Q6J9G0 422 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 OLFM4Q6UX06 510 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
MUC1-227ENST00000615517 BRPF1P55201 1214 aaPredicted RBP9.58□□□□□ -0.88
MUC1-227ENST00000615517 FKBP4Q02790 459 aaKnown RBP eCLIP9.58□□□□□ -0.88
MUC1-227ENST00000615517 SLC39A6Q13433 755 aa9.58□□□□□ -0.88
MUC1-227ENST00000615517 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
MUC1-227ENST00000615517 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
MUC1-227ENST00000615517 ZIC5Q96T25 663 aa9.58□□□□□ -0.88
MUC1-227ENST00000615517 CANXP27824 592 aaKnown RBP9.57□□□□□ -0.88
MUC1-227ENST00000615517 EIF5P55010 431 aaKnown RBP9.57□□□□□ -0.88
MUC1-227ENST00000615517 AMOTQ4VCS5 1084 aa9.57□□□□□ -0.88
MUC1-227ENST00000615517 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
MUC1-227ENST00000615517 CIAPIN1Q6FI81 312 aa9.57□□□□□ -0.88
MUC1-227ENST00000615517 SAPCD2Q86UD0 394 aa9.57□□□□□ -0.88
MUC1-227ENST00000615517 GPC2Q8N158 579 aa9.57□□□□□ -0.88
MUC1-227ENST00000615517 MRC1P22897 1456 aa9.56□□□□□ -0.88
MUC1-227ENST00000615517 EPS15P42566 896 aa9.56□□□□□ -0.88
MUC1-227ENST00000615517 C1orf141Q5JVX7 400 aa9.56□□□□□ -0.88
MUC1-227ENST00000615517 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
MUC1-227ENST00000615517 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
MUC1-227ENST00000615517 SCNN1DP51172 638 aa9.55□□□□□ -0.88
MUC1-227ENST00000615517 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
MUC1-227ENST00000615517 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
MUC1-227ENST00000615517 SNED1Q8TER0 1413 aa9.55□□□□□ -0.88
MUC1-227ENST00000615517 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
MUC1-227ENST00000615517 CNBD1Q8NA66 436 aa9.54□□□□□ -0.88
MUC1-227ENST00000615517 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
MUC1-227ENST00000615517 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
MUC1-227ENST00000615517 MKI67P46013 3256 aaKnown RBP9.53□□□□□ -0.88
MUC1-227ENST00000615517 A0A087WZG4 1122 aa9.53□□□□□ -0.88
MUC1-227ENST00000615517 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
MUC1-227ENST00000615517 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
MUC1-227ENST00000615517 HABP4Q5JVS0 413 aaKnown RBP9.53□□□□□ -0.88
MUC1-227ENST00000615517 HHIPL1Q96JK4 782 aa9.53□□□□□ -0.88
MUC1-227ENST00000615517 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
MUC1-227ENST00000615517 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
MUC1-227ENST00000615517 ST5P78524 1137 aa9.52□□□□□ -0.89
MUC1-227ENST00000615517 USP50Q70EL3 339 aaPredicted RBP9.52□□□□□ -0.89
MUC1-227ENST00000615517 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
MUC1-227ENST00000615517 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
MUC1-227ENST00000615517 SETDB2Q96T68 719 aa9.52□□□□□ -0.89
MUC1-227ENST00000615517 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
MUC1-227ENST00000615517 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
MUC1-227ENST00000615517 KLRG2A4D1S0 409 aaPredicted RBP9.51□□□□□ -0.89
MUC1-227ENST00000615517 RNMTO43148 476 aaKnown RBP9.51□□□□□ -0.89
MUC1-227ENST00000615517 CAMTA2O94983 1202 aa9.51□□□□□ -0.89
MUC1-227ENST00000615517 NPR1P16066 1061 aa9.51□□□□□ -0.89
MUC1-227ENST00000615517 GLIS2Q9BZE0 524 aaPredicted RBP9.51□□□□□ -0.89
MUC1-227ENST00000615517 CEP290O15078 2479 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 EIF6P56537 245 aaKnown RBP9.5□□□□□ -0.89
MUC1-227ENST00000615517 AKAP4Q5JQC9 854 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 GCC1Q96CN9 775 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 PSMD1Q99460 953 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 CUL9Q8IWT3 2517 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 TRIOBPQ9H2D6 2365 aa9.5□□□□□ -0.89
MUC1-227ENST00000615517 KIAA0100Q14667 2235 aaKnown RBP9.5□□□□□ -0.89
MUC1-227ENST00000615517 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
MUC1-227ENST00000615517 NPHP1O15259 732 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 NOGQ13253 232 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 SULT6B1Q6IMI4 303 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 SLC51AQ86UW1 340 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 JDP2Q8WYK2 163 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 SAGE1Q9NXZ1 904 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
MUC1-227ENST00000615517 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
MUC1-227ENST00000615517 TRPA1O75762 1119 aa9.48□□□□□ -0.89
MUC1-227ENST00000615517 STARD3NLO95772 234 aa9.48□□□□□ -0.89
MUC1-227ENST00000615517 IL6STP40189 918 aaPredicted RBP9.48□□□□□ -0.89
MUC1-227ENST00000615517 FXR1P51114 621 aaKnown RBP eCLIP9.48□□□□□ -0.89
MUC1-227ENST00000615517 DLK2Q6UY11 383 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms