RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 ZC3H4Q9UPT8 1303 aaKnown RBP13.03□□□□□ -0.32
PCDH15-228ENST00000615043 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
PCDH15-228ENST00000615043 DCCP43146 1447 aa13.03□□□□□ -0.32
PCDH15-228ENST00000615043 KCNA1Q09470 495 aa13.02□□□□□ -0.33
PCDH15-228ENST00000615043 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
PCDH15-228ENST00000615043 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
PCDH15-228ENST00000615043 A0A1W2PP64 1363 aa13.02□□□□□ -0.33
PCDH15-228ENST00000615043 CD163L1Q9NR16 1453 aa13.02□□□□□ -0.33
PCDH15-228ENST00000615043 ATF3P18847 181 aa13.01□□□□□ -0.33
PCDH15-228ENST00000615043 CTHP32929 405 aa13.01□□□□□ -0.33
PCDH15-228ENST00000615043 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
PCDH15-228ENST00000615043 MON2Q7Z3U7 1717 aa13□□□□□ -0.33
PCDH15-228ENST00000615043 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
PCDH15-228ENST00000615043 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
PCDH15-228ENST00000615043 MST1RQ04912 1400 aa12.99□□□□□ -0.33
PCDH15-228ENST00000615043 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
PCDH15-228ENST00000615043 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
PCDH15-228ENST00000615043 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
PCDH15-228ENST00000615043 WNT2BQ93097 391 aa12.99□□□□□ -0.33
PCDH15-228ENST00000615043 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
PCDH15-228ENST00000615043 C1orf167Q5SNV9 1468 aa12.98□□□□□ -0.33
PCDH15-228ENST00000615043 ANP32CO43423 234 aa12.98□□□□□ -0.33
PCDH15-228ENST00000615043 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
PCDH15-228ENST00000615043 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
PCDH15-228ENST00000615043 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
PCDH15-228ENST00000615043 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
PCDH15-228ENST00000615043 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
PCDH15-228ENST00000615043 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
PCDH15-228ENST00000615043 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
PCDH15-228ENST00000615043 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
PCDH15-228ENST00000615043 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
PCDH15-228ENST00000615043 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
PCDH15-228ENST00000615043 ACEP12821 1306 aa12.96□□□□□ -0.33
PCDH15-228ENST00000615043 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
PCDH15-228ENST00000615043 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
PCDH15-228ENST00000615043 NGDNQ8NEJ9 315 aaKnown RBP12.96□□□□□ -0.33
PCDH15-228ENST00000615043 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.33
PCDH15-228ENST00000615043 CCNYL3P0C7X3 344 aa12.95□□□□□ -0.34
PCDH15-228ENST00000615043 SKIP12755 728 aa12.95□□□□□ -0.34
PCDH15-228ENST00000615043 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
PCDH15-228ENST00000615043 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
PCDH15-228ENST00000615043 EVA1BQ9NVM1 165 aa12.95□□□□□ -0.34
PCDH15-228ENST00000615043 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
PCDH15-228ENST00000615043 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
PCDH15-228ENST00000615043 ARMC2Q8NEN0 867 aa12.94□□□□□ -0.34
PCDH15-228ENST00000615043 SPSB2Q99619 263 aa12.94□□□□□ -0.34
PCDH15-228ENST00000615043 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
PCDH15-228ENST00000615043 USP6P35125 1406 aa12.94□□□□□ -0.34
PCDH15-228ENST00000615043 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
PCDH15-228ENST00000615043 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
PCDH15-228ENST00000615043 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
PCDH15-228ENST00000615043 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
PCDH15-228ENST00000615043 NUDT12Q9BQG2 462 aa12.93□□□□□ -0.34
PCDH15-228ENST00000615043 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
PCDH15-228ENST00000615043 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
PCDH15-228ENST00000615043 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 PTK2Q05397 1052 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 USP17L2Q6R6M4 530 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
PCDH15-228ENST00000615043 GPSM3Q9Y4H4 160 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 NSD2O96028 1365 aa12.92□□□□□ -0.34
PCDH15-228ENST00000615043 USP17L5A8MUK1 530 aa12.91□□□□□ -0.34
PCDH15-228ENST00000615043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDH15-228ENST00000615043 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
PCDH15-228ENST00000615043 FAM174AQ8TBP5 190 aa12.91□□□□□ -0.34
PCDH15-228ENST00000615043 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
PCDH15-228ENST00000615043 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
PCDH15-228ENST00000615043 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 MMP16P51512 607 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 COPS2P61201 443 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 ELOAQ14241 798 aaKnown RBP12.9□□□□□ -0.34
PCDH15-228ENST00000615043 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
PCDH15-228ENST00000615043 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 RALBP1Q15311 655 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 DEPDC4Q8N2C3 294 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 CEP126Q9P2H0 1117 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 MTMR7Q9Y216 660 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
PCDH15-228ENST00000615043 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
PCDH15-228ENST00000615043 FOXO3O43524 673 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 MCCD1P59942 119 aaPredicted RBP12.88□□□□□ -0.35
PCDH15-228ENST00000615043 PSME1Q06323 249 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 SLFNL1Q499Z3 407 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 BRINP3Q76B58 766 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 NME9Q86XW9 330 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
PCDH15-228ENST00000615043 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms