RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 RRAGCQ9HB90 399 aa14.79□□□□□ -0.04
CBWD1-222ENST00000613508 KLRG2A4D1S0 409 aaPredicted RBP14.78□□□□□ -0.04
CBWD1-222ENST00000613508 PNISRQ8TF01 805 aaKnown RBP14.78□□□□□ -0.04
CBWD1-222ENST00000613508 CNKSR1Q969H4 720 aa14.78□□□□□ -0.04
CBWD1-222ENST00000613508 ZNF622Q969S3 477 aaKnown RBP eCLIP14.78□□□□□ -0.04
CBWD1-222ENST00000613508 C21orf2O43822 256 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 NEFMP07197 916 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 VEGFAP15692 232 aaPredicted RBP14.77□□□□□ -0.05
CBWD1-222ENST00000613508 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
CBWD1-222ENST00000613508 SOGA3Q5TF21 947 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 CCDC24Q8N4L8 307 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 FER1L6Q2WGJ9 1857 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.05
CBWD1-222ENST00000613508 WDR90Q96KV7 1748 aa14.76□□□□□ -0.05
CBWD1-222ENST00000613508 NFE2L2Q16236 605 aa14.76□□□□□ -0.05
CBWD1-222ENST00000613508 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
CBWD1-222ENST00000613508 NBPF5PQ86XG9 351 aaPredicted RBP14.76□□□□□ -0.05
CBWD1-222ENST00000613508 SMC1BQ8NDV3 1235 aa14.76□□□□□ -0.05
CBWD1-222ENST00000613508 MASTLQ96GX5 879 aa14.76□□□□□ -0.05
CBWD1-222ENST00000613508 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
CBWD1-222ENST00000613508 LAMB4A4D0S4 1761 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 ARFGEF2Q9Y6D5 1785 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 NPHP1O15259 732 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 IFFO2Q5TF58 517 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 TPTE2Q6XPS3 522 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 MIS18AQ9NYP9 233 aa14.75□□□□□ -0.05
CBWD1-222ENST00000613508 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
CBWD1-222ENST00000613508 NPR1P16066 1061 aa14.74□□□□□ -0.05
CBWD1-222ENST00000613508 DPY19L2Q6NUT2 758 aa14.74□□□□□ -0.05
CBWD1-222ENST00000613508 TAOK3Q9H2K8 898 aa14.74□□□□□ -0.05
CBWD1-222ENST00000613508 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
CBWD1-222ENST00000613508 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
CBWD1-222ENST00000613508 DICER1Q9UPY3 1922 aaKnown RBP14.73□□□□□ -0.05
CBWD1-222ENST00000613508 EIF4A1P60842 406 aaKnown RBP14.73□□□□□ -0.05
CBWD1-222ENST00000613508 ERFEQ4G0M1 354 aa14.73□□□□□ -0.05
CBWD1-222ENST00000613508 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
CBWD1-222ENST00000613508 CCDC88AQ3V6T2 1871 aa14.73□□□□□ -0.05
CBWD1-222ENST00000613508 POTECB2RU33 542 aa14.72□□□□□ -0.05
CBWD1-222ENST00000613508 HLFQ16534 295 aa14.72□□□□□ -0.05
CBWD1-222ENST00000613508 KLRG1Q96E93 195 aa14.72□□□□□ -0.05
CBWD1-222ENST00000613508 RALBP1Q15311 655 aa14.71□□□□□ -0.05
CBWD1-222ENST00000613508 JMYQ8N9B5 988 aa14.71□□□□□ -0.05
CBWD1-222ENST00000613508 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
CBWD1-222ENST00000613508 IBTKQ9P2D0 1353 aaPredicted RBP14.71□□□□□ -0.06
CBWD1-222ENST00000613508 ERBB4Q15303 1308 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 MAPK8IP3Q9UPT6 1336 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 RIC1Q4ADV7 1423 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 CRY2Q49AN0 593 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 CCDC93Q567U6 631 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 BABAM1Q9NWV8 329 aa14.7□□□□□ -0.06
CBWD1-222ENST00000613508 MAP3K15Q6ZN16 1313 aa14.69□□□□□ -0.06
CBWD1-222ENST00000613508 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
CBWD1-222ENST00000613508 NYXQ9GZU5 481 aa14.69□□□□□ -0.06
CBWD1-222ENST00000613508 ALDH1B1P30837 517 aa14.68□□□□□ -0.06
CBWD1-222ENST00000613508 HTRA3P83110 453 aa14.68□□□□□ -0.06
CBWD1-222ENST00000613508 KIF6Q6ZMV9 814 aa14.68□□□□□ -0.06
CBWD1-222ENST00000613508 RTKN2Q8IZC4 609 aa14.68□□□□□ -0.06
CBWD1-222ENST00000613508 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
CBWD1-222ENST00000613508 FKBP4Q02790 459 aaKnown RBP eCLIP14.67□□□□□ -0.06
CBWD1-222ENST00000613508 TTLL7Q6ZT98 887 aa14.67□□□□□ -0.06
CBWD1-222ENST00000613508 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
CBWD1-222ENST00000613508 CACNA1SQ13698 1873 aa14.66□□□□□ -0.06
CBWD1-222ENST00000613508 ABCC12Q96J65 1359 aa14.66□□□□□ -0.06
CBWD1-222ENST00000613508 GTF2E1P29083 439 aaPredicted RBP14.66□□□□□ -0.06
CBWD1-222ENST00000613508 HOXA10P31260 410 aaPredicted RBP14.66□□□□□ -0.06
CBWD1-222ENST00000613508 LRP10Q7Z4F1 713 aa14.66□□□□□ -0.06
CBWD1-222ENST00000613508 ZNF34Q8IZ26 560 aa14.66□□□□□ -0.06
CBWD1-222ENST00000613508 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
CBWD1-222ENST00000613508 NUP98P52948 1817 aa14.66□□□□□ -0.06
CBWD1-222ENST00000613508 FAM177BA6PVY3 158 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 DDNO94850 711 aaPredicted RBP14.65□□□□□ -0.06
CBWD1-222ENST00000613508 RIPK4P57078 832 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 LMOD3Q0VAK6 560 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 CC2D2BQ6DHV5 1058 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 UBN2Q6ZU65 1347 aa14.65□□□□□ -0.06
CBWD1-222ENST00000613508 IQCA1LA6NCM1 817 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 MYL6BP14649 208 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 TMPOP42166 694 aaKnown RBP14.64□□□□□ -0.07
CBWD1-222ENST00000613508 PDIA6Q15084 440 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 GRIPAP1Q4V328 841 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
CBWD1-222ENST00000613508 NGEFQ8N5V2 710 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 PSMD1Q99460 953 aa14.64□□□□□ -0.07
CBWD1-222ENST00000613508 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
CBWD1-222ENST00000613508 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
CBWD1-222ENST00000613508 OLFM4Q6UX06 510 aa14.63□□□□□ -0.07
CBWD1-222ENST00000613508 NUTM1Q86Y26 1132 aa14.63□□□□□ -0.07
CBWD1-222ENST00000613508 ZBTB3Q9H5J0 574 aa14.63□□□□□ -0.07
CBWD1-222ENST00000613508 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
CBWD1-222ENST00000613508 MYBBP1AQ9BQG0 1328 aaKnown RBP14.63□□□□□ -0.07
CBWD1-222ENST00000613508 SCN4AP35499 1836 aa14.62□□□□□ -0.07
CBWD1-222ENST00000613508 FZD9O00144 591 aa14.62□□□□□ -0.07
CBWD1-222ENST00000613508 NTSR2O95665 410 aa14.62□□□□□ -0.07
CBWD1-222ENST00000613508 GPTP24298 496 aa14.62□□□□□ -0.07
CBWD1-222ENST00000613508 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
CBWD1-222ENST00000613508 SUSD4Q5VX71 490 aa14.62□□□□□ -0.07
CBWD1-222ENST00000613508 CRAMP1Q96RY5 1269 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms