RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ECHDC1Q9NTX5 307 aa10.31□□□□□ -0.76
PDE6A-204ENST00000613228 ARGLU1Q9NWB6 273 aaPredicted RBP10.31□□□□□ -0.76
PDE6A-204ENST00000613228 TTF1Q15361 905 aaPredicted RBP10.3□□□□□ -0.76
PDE6A-204ENST00000613228 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
PDE6A-204ENST00000613228 ANKRD18BA2A2Z9 1011 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 MAPK8IP2Q13387 824 aaPredicted RBP10.3□□□□□ -0.76
PDE6A-204ENST00000613228 TBC1D32Q96NH3 1257 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 GOLGA6L19H0YKK7 550 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 CBX1P83916 185 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 SIL1Q9H173 461 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 CHPF2Q9P2E5 772 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 ANAPC15P60006 121 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 IFIT5Q13325 482 aaKnown RBP10.3□□□□□ -0.76
PDE6A-204ENST00000613228 BLOC1S2Q6QNY1 142 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 LINS1Q8NG48 757 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 CCDC94Q9BW85 323 aaPredicted RBP10.3□□□□□ -0.76
PDE6A-204ENST00000613228 HMG20BQ9P0W2 317 aa10.3□□□□□ -0.76
PDE6A-204ENST00000613228 PI4KAP2A4QPH2 592 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 VPS37CA5D8V6 355 aaPredicted RBP10.29□□□□□ -0.76
PDE6A-204ENST00000613228 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
PDE6A-204ENST00000613228 PI4KAP1Q8N8J0 262 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 SLC5A1P13866 664 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 IFIT1P09914 478 aaKnown RBP10.29□□□□□ -0.76
PDE6A-204ENST00000613228 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 PPP1R42Q7Z4L9 355 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 RASSF8Q8NHQ8 419 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 IL1RAPL2Q9NP60 686 aa10.29□□□□□ -0.76
PDE6A-204ENST00000613228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDE6A-204ENST00000613228 FBLN1P23142 703 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 WASF1Q92558 559 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 CPSF1Q10570 1443 aaKnown RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 USP8P40818 1118 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 FOXD4L5Q5VV16 416 aaPredicted RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 FOXD4L4Q8WXT5 416 aaPredicted RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 NAT10Q9H0A0 1025 aaKnown RBP10.28□□□□□ -0.76
PDE6A-204ENST00000613228 PTPRMP28827 1452 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 GRM8O00222 908 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 METTL24Q5JXM2 366 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 NCAPD2Q15021 1401 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 ABCC4O15439 1325 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 RHPN1Q8TCX5 695 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 SNX21Q969T3 373 aa10.28□□□□□ -0.76
PDE6A-204ENST00000613228 USP31Q70CQ4 1352 aa10.27□□□□□ -0.76
PDE6A-204ENST00000613228 CFAP65Q6ZU64 1925 aaKnown RBP10.27□□□□□ -0.76
PDE6A-204ENST00000613228 EPB41L2O43491 1005 aaKnown RBP10.27□□□□□ -0.76
PDE6A-204ENST00000613228 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.76
PDE6A-204ENST00000613228 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.76
PDE6A-204ENST00000613228 DDX21Q9NR30 783 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDE6A-204ENST00000613228 ZPR1O75312 459 aa10.27□□□□□ -0.77
PDE6A-204ENST00000613228 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.77
PDE6A-204ENST00000613228 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
PDE6A-204ENST00000613228 RAD50Q92878 1312 aa10.27□□□□□ -0.77
PDE6A-204ENST00000613228 SMARCA5O60264 1052 aaPredicted RBP10.27□□□□□ -0.77
PDE6A-204ENST00000613228 PIP4K2BP78356 416 aa10.27□□□□□ -0.77
PDE6A-204ENST00000613228 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
PDE6A-204ENST00000613228 BECN2A8MW95 431 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 MEIS3Q99687 375 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 PPLO60437 1756 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 USP32Q8NFA0 1604 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 GTF2A1P52655 376 aaPredicted RBP10.26□□□□□ -0.77
PDE6A-204ENST00000613228 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
PDE6A-204ENST00000613228 MYO3AQ8NEV4 1616 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
PDE6A-204ENST00000613228 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 JAKMIP1Q96N16 626 aaKnown RBP10.26□□□□□ -0.77
PDE6A-204ENST00000613228 SLC52A2Q9HAB3 445 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 MARCH6O60337 910 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 MCM5P33992 734 aa10.26□□□□□ -0.77
PDE6A-204ENST00000613228 CDC5LQ99459 802 aaKnown RBP10.26□□□□□ -0.77
PDE6A-204ENST00000613228 IL15P40933 162 aaPredicted RBP10.25□□□□□ -0.77
PDE6A-204ENST00000613228 CHRNA2Q15822 529 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 CAVIN4Q5BKX8 364 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 CTR9Q6PD62 1173 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 XAGE3Q8WTP9 111 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 AK7Q96M32 723 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 TRMT112Q9UI30 125 aaKnown RBP10.25□□□□□ -0.77
PDE6A-204ENST00000613228 ERVV-2B6SEH9 535 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 TECPR2O15040 1411 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
PDE6A-204ENST00000613228 TERF1P54274 439 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 PDE1AP54750 535 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 ANKRD20A12PQ8NF67 263 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 PNPLA6Q8IY17 1366 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 RLBP1P12271 317 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 C8orf34Q49A92 452 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 LEKR1Q6ZMV7 388 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
PDE6A-204ENST00000613228 ZNF287Q9HBT7 754 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms