RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 TPCN2Q8NHX9 752 aa9.02□□□□□ -0.97
TARDBP-214ENST00000613177 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
TARDBP-214ENST00000613177 PRR12Q9ULL5 1215 aa9.02□□□□□ -0.97
TARDBP-214ENST00000613177 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
TARDBP-214ENST00000613177 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
TARDBP-214ENST00000613177 CLDN10P78369 228 aa9.01□□□□□ -0.97
TARDBP-214ENST00000613177 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
TARDBP-214ENST00000613177 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
TARDBP-214ENST00000613177 RAD21O60216 631 aa9□□□□□ -0.97
TARDBP-214ENST00000613177 ELOA3CA0A087WX78 387 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-214ENST00000613177 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 ELOA3DA6NLF2 546 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-214ENST00000613177 FURINP09958 794 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 HIRAP54198 1017 aaPredicted RBP8.99□□□□□ -0.97
TARDBP-214ENST00000613177 FLIIQ13045 1269 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 ELOA3BQ3SY89 546 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 CCDC102BQ68D86 513 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 SYT9Q86SS6 491 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 ELOA3Q8NG57 546 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
TARDBP-214ENST00000613177 SIN3BO75182 1162 aa8.98□□□□□ -0.97
TARDBP-214ENST00000613177 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
TARDBP-214ENST00000613177 PSMA6P60900 246 aaKnown RBP8.98□□□□□ -0.97
TARDBP-214ENST00000613177 TSPAN10Q9H1Z9 355 aaPredicted RBP8.98□□□□□ -0.97
TARDBP-214ENST00000613177 ADARB2-AS1A8MUL3 147 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 M0R2N6 131 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 ATP9BO43861 1147 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 DKK1O94907 266 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
TARDBP-214ENST00000613177 SFSWAPQ12872 951 aaKnown RBP8.97□□□□□ -0.97
TARDBP-214ENST00000613177 XP32Q5T750 250 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 C1orf53Q5VUE5 145 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 SLC30A3Q99726 388 aa8.97□□□□□ -0.97
TARDBP-214ENST00000613177 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
TARDBP-214ENST00000613177 RHPN1Q8TCX5 695 aa8.96□□□□□ -0.98
TARDBP-214ENST00000613177 PLVAPQ9BX97 442 aa8.96□□□□□ -0.98
TARDBP-214ENST00000613177 COL9A3Q14050 684 aaPredicted RBP8.95□□□□□ -0.98
TARDBP-214ENST00000613177 SIX5Q8N196 739 aa8.95□□□□□ -0.98
TARDBP-214ENST00000613177 OGFOD1Q8N543 542 aa8.95□□□□□ -0.98
TARDBP-214ENST00000613177 TNFRSF25Q93038 417 aa8.95□□□□□ -0.98
TARDBP-214ENST00000613177 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
TARDBP-214ENST00000613177 MKRN1Q9UHC7 482 aaKnown RBP8.94□□□□□ -0.98
TARDBP-214ENST00000613177 STARD13Q9Y3M8 1113 aa8.94□□□□□ -0.98
TARDBP-214ENST00000613177 C21orf2O43822 256 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 SPATA31C1P0DKV0 1188 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 ALAS2P22557 587 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 KCNQ4P56696 695 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 TSEN2Q8NCE0 465 aaKnown RBP8.93□□□□□ -0.98
TARDBP-214ENST00000613177 HSH2DQ96JZ2 352 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 NEUROD4Q9HD90 331 aa8.93□□□□□ -0.98
TARDBP-214ENST00000613177 ITGB7P26010 798 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 TYRO3Q06418 890 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 ZNF280CQ8ND82 737 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 BRD7Q9NPI1 651 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 PRDM6Q9NQX0 595 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 HCN4Q9Y3Q4 1203 aa8.92□□□□□ -0.98
TARDBP-214ENST00000613177 ZNF594Q96JF6 807 aaPredicted RBP8.91□□□□□ -0.98
TARDBP-214ENST00000613177 SFI1A8K8P3 1242 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 M0R082 166 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 ALBP02768 609 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 RAB44Q7Z6P3 723 aaPredicted RBP8.9□□□□□ -0.98
TARDBP-214ENST00000613177 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 CEP63Q96MT8 703 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 ZNF587Q96SQ5 575 aaPredicted RBP8.9□□□□□ -0.98
TARDBP-214ENST00000613177 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
TARDBP-214ENST00000613177 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
TARDBP-214ENST00000613177 ADH7P40394 386 aa8.89□□□□□ -0.99
TARDBP-214ENST00000613177 STAG2Q8N3U4 1231 aa8.89□□□□□ -0.99
TARDBP-214ENST00000613177 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
TARDBP-214ENST00000613177 CHMP3Q9Y3E7 222 aa8.89□□□□□ -0.99
TARDBP-214ENST00000613177 SPDYE3A6NKU9 549 aa8.88□□□□□ -0.99
TARDBP-214ENST00000613177 DOC2BQ14184 412 aa8.88□□□□□ -0.99
TARDBP-214ENST00000613177 C20orf204Q6ZNR8 217 aa8.88□□□□□ -0.99
TARDBP-214ENST00000613177 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
TARDBP-214ENST00000613177 C2orf49Q9BVC5 232 aaPredicted RBP8.88□□□□□ -0.99
TARDBP-214ENST00000613177 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
TARDBP-214ENST00000613177 NID1P14543 1247 aa8.87□□□□□ -0.99
TARDBP-214ENST00000613177 GATA4P43694 442 aa8.87□□□□□ -0.99
TARDBP-214ENST00000613177 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
TARDBP-214ENST00000613177 ALDH16A1Q8IZ83 802 aa8.87□□□□□ -0.99
TARDBP-214ENST00000613177 Q8N3U1 123 aa8.87□□□□□ -0.99
TARDBP-214ENST00000613177 MAFBQ9Y5Q3 323 aaPredicted RBP8.87□□□□□ -0.99
TARDBP-214ENST00000613177 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
TARDBP-214ENST00000613177 PRRT3Q5FWE3 981 aa8.86□□□□□ -0.99
TARDBP-214ENST00000613177 GLMNQ92990 594 aa8.86□□□□□ -0.99
TARDBP-214ENST00000613177 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
TARDBP-214ENST00000613177 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
TARDBP-214ENST00000613177 RASA1P20936 1047 aa8.85□□□□□ -0.99
TARDBP-214ENST00000613177 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
TARDBP-214ENST00000613177 GAS2L2Q8NHY3 880 aa8.85□□□□□ -0.99
TARDBP-214ENST00000613177 CLUAP1Q96AJ1 413 aa8.85□□□□□ -0.99
TARDBP-214ENST00000613177 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
TARDBP-214ENST00000613177 SEC13P55735 322 aa8.84□□□□□ -0.99
TARDBP-214ENST00000613177 PROSER2Q86WR7 435 aaPredicted RBP8.84□□□□□ -0.99
TARDBP-214ENST00000613177 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
TARDBP-214ENST00000613177 SEMA6BQ9H3T3 888 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms