RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
HLCS-207ENST00000612277 ZEB2O60315 1214 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 PIP4K2BP78356 416 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
HLCS-207ENST00000612277 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 MYO1BO43795 1136 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 GMNNO75496 209 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 CCDC40Q4G0X9 1142 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.13
HLCS-207ENST00000612277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.21□□□□□ -0.14
HLCS-207ENST00000612277 MAP7Q14244 749 aa14.21□□□□□ -0.14
HLCS-207ENST00000612277 NEDD9Q14511 834 aa14.21□□□□□ -0.14
HLCS-207ENST00000612277 FMNL3Q8IVF7 1028 aa14.21□□□□□ -0.14
HLCS-207ENST00000612277 RAB34Q9BZG1 259 aa14.21□□□□□ -0.14
HLCS-207ENST00000612277 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.14
HLCS-207ENST00000612277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.21□□□□□ -0.141e-7■□□□□ 11.2
HLCS-207ENST00000612277 TMEM266Q2M3C6 531 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 CEP128Q6ZU80 1094 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
HLCS-207ENST00000612277 TWISTNBQ3B726 338 aaPredicted RBP14.2□□□□□ -0.14
HLCS-207ENST00000612277 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
HLCS-207ENST00000612277 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 AACSQ86V21 672 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 CAVIN2O95810 425 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 SMC1BQ8NDV3 1235 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 USH1CQ9Y6N9 552 aa14.2□□□□□ -0.14
HLCS-207ENST00000612277 SH2D4BQ5SQS7 431 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 DNAI1Q9UI46 699 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
HLCS-207ENST00000612277 ATP2A1O14983 1001 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 ZBTB17Q13105 803 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 SSFA2P28290 1259 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 KIF5AQ12840 1032 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 TNPO1Q92973 898 aaKnown RBP14.19□□□□□ -0.14
HLCS-207ENST00000612277 CYLC1P35663 651 aaPredicted RBP14.19□□□□□ -0.14
HLCS-207ENST00000612277 PPP1R9BQ96SB3 815 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 SIL1Q9H173 461 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 CCDC172P0C7W6 258 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 PRPHP41219 470 aa14.19□□□□□ -0.14
HLCS-207ENST00000612277 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
HLCS-207ENST00000612277 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
HLCS-207ENST00000612277 CTAGE9A4FU28 777 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
HLCS-207ENST00000612277 LRCH2Q5VUJ6 765 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 CCDC7Q96M83 1385 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 SH3BGRP55822 239 aaPredicted RBP14.18□□□□□ -0.14
HLCS-207ENST00000612277 TMCO4Q5TGY1 634 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 NUF2Q9BZD4 464 aa14.18□□□□□ -0.14
HLCS-207ENST00000612277 AMPD3Q01432 767 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 BANK1Q8NDB2 785 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
HLCS-207ENST00000612277 PRR16Q569H4 304 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 AP1ARQ63HQ0 302 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 CDCA7LQ96GN5 454 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 SATB1Q01826 763 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 ADAMTS8Q9UP79 889 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
HLCS-207ENST00000612277 KCNK9Q9NPC2 374 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 KRT13P13646 458 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 BRD2P25440 801 aaKnown RBP14.17□□□□□ -0.14
HLCS-207ENST00000612277 MAP2K2P36507 400 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 HDXQ7Z353 690 aa14.17□□□□□ -0.14
HLCS-207ENST00000612277 INPP5BP32019 993 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 NBPF8Q3BBV2 869 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 ODF2LQ9ULJ1 636 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 ZNF165P49910 485 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 MIER3Q7Z3K6 550 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 TTC16Q8NEE8 873 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 BIN1O00499 593 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 AKR1B10O60218 316 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 TBC1D5Q92609 795 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 SKILP12757 684 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 TCERG1LQ5VWI1 586 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 CCDC38Q502W7 563 aa14.16□□□□□ -0.14
HLCS-207ENST00000612277 MGEA5O60502 916 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 PHLDB2Q86SQ0 1253 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
HLCS-207ENST00000612277 ZSCAN23Q3MJ62 389 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 CCDC196A0A1B0GTZ2 297 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 HNRNPMP52272 730 aaKnown RBP eCLIP14.15□□□□□ -0.148e-6■■■■□ 21.3
HLCS-207ENST00000612277 PSME1Q06323 249 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
HLCS-207ENST00000612277 KIAA1524Q8TCG1 905 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms