RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 PPP2R1AP30153 589 aa17.82■□□□□ 0.44
HMGB1P24-201ENST00000611897 KLRG1Q96E93 195 aa17.82■□□□□ 0.44
HMGB1P24-201ENST00000611897 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
HMGB1P24-201ENST00000611897 DICER1Q9UPY3 1922 aaKnown RBP17.81■□□□□ 0.44
HMGB1P24-201ENST00000611897 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
HMGB1P24-201ENST00000611897 ERFEQ4G0M1 354 aa17.81■□□□□ 0.44
HMGB1P24-201ENST00000611897 NBPF5PQ86XG9 351 aaPredicted RBP17.8■□□□□ 0.44
HMGB1P24-201ENST00000611897 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
HMGB1P24-201ENST00000611897 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
HMGB1P24-201ENST00000611897 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
HMGB1P24-201ENST00000611897 DPY19L2Q6NUT2 758 aa17.79■□□□□ 0.44
HMGB1P24-201ENST00000611897 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
HMGB1P24-201ENST00000611897 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
HMGB1P24-201ENST00000611897 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
HMGB1P24-201ENST00000611897 ZNF652Q9Y2D9 606 aa17.78■□□□□ 0.44
HMGB1P24-201ENST00000611897 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 NEFMP07197 916 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 SRGNP10124 158 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 NGEFQ8N5V2 710 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 MASTLQ96GX5 879 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 NIP7Q9Y221 180 aaKnown RBP eCLIP17.76■□□□□ 0.43
HMGB1P24-201ENST00000611897 PCNTO95613 3336 aa17.75■□□□□ 0.43
HMGB1P24-201ENST00000611897 NBPF26B4DH59 902 aa17.74■□□□□ 0.43
HMGB1P24-201ENST00000611897 DDNO94850 711 aaPredicted RBP17.74■□□□□ 0.43
HMGB1P24-201ENST00000611897 NBPF10Q6P3W6 841 aaKnown RBP17.74■□□□□ 0.43
HMGB1P24-201ENST00000611897 NBPF15Q8N660 670 aa17.74■□□□□ 0.43
HMGB1P24-201ENST00000611897 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
HMGB1P24-201ENST00000611897 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
HMGB1P24-201ENST00000611897 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
HMGB1P24-201ENST00000611897 POTECB2RU33 542 aa17.72■□□□□ 0.43
HMGB1P24-201ENST00000611897 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
HMGB1P24-201ENST00000611897 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
HMGB1P24-201ENST00000611897 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
HMGB1P24-201ENST00000611897 NPR1P16066 1061 aa17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 THUMPD2Q9BTF0 503 aaKnown RBP17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.43
HMGB1P24-201ENST00000611897 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 CAPN15O75808 1086 aa17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 POTEIP0CG38 1075 aa17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 POTEJP0CG39 1038 aa17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 HLFQ16534 295 aa17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 ZNF277Q9NRM2 450 aaPredicted RBP17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
HMGB1P24-201ENST00000611897 ABCC12Q96J65 1359 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 NUP98P52948 1817 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 HSPA1AP0DMV8 641 aaKnown RBP17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 HSPA1BP0DMV9 641 aaKnown RBP17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 MYL6BP14649 208 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
HMGB1P24-201ENST00000611897 GPTP24298 496 aa17.67■□□□□ 0.42
HMGB1P24-201ENST00000611897 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGB1P24-201ENST00000611897 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
HMGB1P24-201ENST00000611897 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
HMGB1P24-201ENST00000611897 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
HMGB1P24-201ENST00000611897 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
HMGB1P24-201ENST00000611897 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
HMGB1P24-201ENST00000611897 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
HMGB1P24-201ENST00000611897 IQCA1LA6NCM1 817 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 TNS4Q8IZW8 715 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 C7orf43Q8WVR3 580 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 SCN4AP35499 1836 aa17.65■□□□□ 0.42
HMGB1P24-201ENST00000611897 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
HMGB1P24-201ENST00000611897 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
HMGB1P24-201ENST00000611897 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
HMGB1P24-201ENST00000611897 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
HMGB1P24-201ENST00000611897 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
HMGB1P24-201ENST00000611897 TAF1DQ9H5J8 278 aaPredicted RBP17.63■□□□□ 0.41
HMGB1P24-201ENST00000611897 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
HMGB1P24-201ENST00000611897 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 LDHDQ86WU2 507 aa17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
HMGB1P24-201ENST00000611897 RGL2O15211 777 aa17.61■□□□□ 0.41
HMGB1P24-201ENST00000611897 L3MBTL3Q96JM7 780 aaPredicted RBP17.61■□□□□ 0.41
HMGB1P24-201ENST00000611897 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
HMGB1P24-201ENST00000611897 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
HMGB1P24-201ENST00000611897 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
HMGB1P24-201ENST00000611897 ERVV-1B6SEH8 477 aa17.6■□□□□ 0.41
HMGB1P24-201ENST00000611897 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
HMGB1P24-201ENST00000611897 GJA3Q9Y6H8 435 aa17.6■□□□□ 0.41
HMGB1P24-201ENST00000611897 UBN2Q6ZU65 1347 aa17.6■□□□□ 0.41
HMGB1P24-201ENST00000611897 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
HMGB1P24-201ENST00000611897 SLC51AQ86UW1 340 aa17.59■□□□□ 0.41
HMGB1P24-201ENST00000611897 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
HMGB1P24-201ENST00000611897 ANXA1P04083 346 aa17.58■□□□□ 0.4
HMGB1P24-201ENST00000611897 EPHX2P34913 555 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms