RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-223ENST00000611614 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-223ENST00000611614 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-223ENST00000611614 MAP3K2Q9Y2U5 619 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 AFF2P51816 1311 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 BCL9O00512 1426 aa17.04■□□□□ 0.32
COPS7B-223ENST00000611614 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 DDIT3P35638 169 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 NEXNQ0ZGT2 675 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 ARXQ96QS3 562 aa17.03■□□□□ 0.32
COPS7B-223ENST00000611614 APBB1O00213 710 aa17.02■□□□□ 0.32
COPS7B-223ENST00000611614 STARD3NLO95772 234 aa17.02■□□□□ 0.32
COPS7B-223ENST00000611614 UBTFL1P0CB47 393 aaPredicted RBP17.02■□□□□ 0.32
COPS7B-223ENST00000611614 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.31
COPS7B-223ENST00000611614 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.31
COPS7B-223ENST00000611614 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.31
COPS7B-223ENST00000611614 TRPC5Q9UL62 973 aaPredicted RBP17.02■□□□□ 0.31
COPS7B-223ENST00000611614 ADCY9O60503 1353 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 C5P01031 1676 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 SDSP20132 328 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
COPS7B-223ENST00000611614 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
COPS7B-223ENST00000611614 CASC1Q6TDU7 716 aa17■□□□□ 0.31
COPS7B-223ENST00000611614 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 CIZ1Q9ULV3 898 aaPredicted RBP16.99■□□□□ 0.31
COPS7B-223ENST00000611614 TRAK2O60296 914 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
COPS7B-223ENST00000611614 PTMSP20962 102 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 MRE11P49959 708 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
COPS7B-223ENST00000611614 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
COPS7B-223ENST00000611614 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
COPS7B-223ENST00000611614 K7ELQ4 463 aaPredicted RBP16.98■□□□□ 0.31
COPS7B-223ENST00000611614 A1BGP04217 495 aa16.98■□□□□ 0.31
COPS7B-223ENST00000611614 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
COPS7B-223ENST00000611614 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
COPS7B-223ENST00000611614 RRAGDQ9NQL2 400 aaPredicted RBP16.98■□□□□ 0.31
COPS7B-223ENST00000611614 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
COPS7B-223ENST00000611614 CD2BP2O95400 341 aaKnown RBP16.97■□□□□ 0.31
COPS7B-223ENST00000611614 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
COPS7B-223ENST00000611614 ITGB4P16144 1822 aa16.97■□□□□ 0.31
COPS7B-223ENST00000611614 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
COPS7B-223ENST00000611614 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 PDE1AP54750 535 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 RABEP1Q15276 862 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
COPS7B-223ENST00000611614 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 QTRT2Q9H974 415 aaKnown RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
COPS7B-223ENST00000611614 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
COPS7B-223ENST00000611614 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
COPS7B-223ENST00000611614 MYD88Q99836 296 aa16.95■□□□□ 0.3
COPS7B-223ENST00000611614 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
COPS7B-223ENST00000611614 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
COPS7B-223ENST00000611614 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
COPS7B-223ENST00000611614 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
COPS7B-223ENST00000611614 GLI3P10071 1580 aa16.94■□□□□ 0.3
COPS7B-223ENST00000611614 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
COPS7B-223ENST00000611614 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
COPS7B-223ENST00000611614 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
COPS7B-223ENST00000611614 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
COPS7B-223ENST00000611614 CLCN1P35523 988 aa16.93■□□□□ 0.3
COPS7B-223ENST00000611614 PODXL2Q9NZ53 605 aa16.93■□□□□ 0.3
COPS7B-223ENST00000611614 ATRNO75882 1429 aa16.93■□□□□ 0.3
COPS7B-223ENST00000611614 REC8O95072 547 aa16.93■□□□□ 0.3
COPS7B-223ENST00000611614 KIF6Q6ZMV9 814 aa16.93■□□□□ 0.3
COPS7B-223ENST00000611614 GRM8O00222 908 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
COPS7B-223ENST00000611614 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 ERC2O15083 957 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 KCNQ2O43526 872 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 GBP4Q96PP9 640 aa16.92■□□□□ 0.3
COPS7B-223ENST00000611614 LOC102724428A0A0B4J2F2 783 aa16.91■□□□□ 0.3
COPS7B-223ENST00000611614 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
COPS7B-223ENST00000611614 SIK1P57059 783 aa16.91■□□□□ 0.3
COPS7B-223ENST00000611614 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
COPS7B-223ENST00000611614 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
COPS7B-223ENST00000611614 PALLDQ8WX93 1383 aa16.91■□□□□ 0.3
COPS7B-223ENST00000611614 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
COPS7B-223ENST00000611614 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms