RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ZNF710Q8N1W2 664 aa19.44■□□□□ 0.7
RTN1-209ENST00000611068 CGNQ9P2M7 1197 aaKnown RBP19.44■□□□□ 0.7
RTN1-209ENST00000611068 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
RTN1-209ENST00000611068 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
RTN1-209ENST00000611068 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
RTN1-209ENST00000611068 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
RTN1-209ENST00000611068 DNAAF4Q8WXU2 420 aa19.43■□□□□ 0.7
RTN1-209ENST00000611068 NBPF7P0C2Y1 421 aaPredicted RBP19.43■□□□□ 0.7
RTN1-209ENST00000611068 PDIA6Q15084 440 aa19.43■□□□□ 0.7
RTN1-209ENST00000611068 HOXB7P09629 217 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 DDIT3P35638 169 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 ANKRD44Q8N8A2 993 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 PNMA6EA0A0J9YXQ4 647 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
RTN1-209ENST00000611068 GNAI2P04899 355 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
RTN1-209ENST00000611068 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 ADCY9O60503 1353 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
RTN1-209ENST00000611068 SNRPA1P09661 255 aaKnown RBP19.4■□□□□ 0.7
RTN1-209ENST00000611068 COPS6Q7L5N1 327 aa19.4■□□□□ 0.7
RTN1-209ENST00000611068 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
RTN1-209ENST00000611068 XAGE3Q8WTP9 111 aa19.4■□□□□ 0.7
RTN1-209ENST00000611068 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
RTN1-209ENST00000611068 SOS1Q07889 1333 aaPredicted RBP19.4■□□□□ 0.7
RTN1-209ENST00000611068 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
RTN1-209ENST00000611068 HS1BP3Q53T59 392 aa19.4■□□□□ 0.7
RTN1-209ENST00000611068 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
RTN1-209ENST00000611068 SKOR2Q2VWA4 1001 aaPredicted RBP19.39■□□□□ 0.7
RTN1-209ENST00000611068 BEND3Q5T5X7 828 aa19.39■□□□□ 0.7
RTN1-209ENST00000611068 GCC1Q96CN9 775 aa19.39■□□□□ 0.7
RTN1-209ENST00000611068 C8orf37Q96NL8 207 aa19.39■□□□□ 0.7
RTN1-209ENST00000611068 ASAP1Q9ULH1 1129 aa19.39■□□□□ 0.7
RTN1-209ENST00000611068 ZKSCAN5Q9Y2L8 839 aa19.39■□□□□ 0.7
RTN1-209ENST00000611068 ABCC6O95255 1503 aa19.39■□□□□ 0.69
RTN1-209ENST00000611068 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
RTN1-209ENST00000611068 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
RTN1-209ENST00000611068 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
RTN1-209ENST00000611068 A1BGP04217 495 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
RTN1-209ENST00000611068 SPDYE4A6NLX3 237 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 FAM177BA6PVY3 158 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
RTN1-209ENST00000611068 ZFP91Q96JP5 570 aaPredicted RBP19.38■□□□□ 0.69
RTN1-209ENST00000611068 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
RTN1-209ENST00000611068 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
RTN1-209ENST00000611068 AHDC1Q5TGY3 1603 aaPredicted RBP19.37■□□□□ 0.69
RTN1-209ENST00000611068 EXOC5O00471 708 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 HSCBQ8IWL3 235 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 GNAI3P08754 354 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 PIGBQ92521 554 aa19.37■□□□□ 0.69
RTN1-209ENST00000611068 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
RTN1-209ENST00000611068 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
RTN1-209ENST00000611068 CDK11BP21127 795 aaKnown RBP19.36■□□□□ 0.69
RTN1-209ENST00000611068 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
RTN1-209ENST00000611068 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
RTN1-209ENST00000611068 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
RTN1-209ENST00000611068 PDLIM2Q96JY6 352 aa19.36■□□□□ 0.69
RTN1-209ENST00000611068 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
RTN1-209ENST00000611068 TSHZ3Q63HK5 1081 aa19.35■□□□□ 0.69
RTN1-209ENST00000611068 COL16A1Q07092 1604 aaPredicted RBP19.35■□□□□ 0.69
RTN1-209ENST00000611068 ATP5J2-PTCD1G3V325 749 aa19.35■□□□□ 0.69
RTN1-209ENST00000611068 NGLY1Q96IV0 654 aa19.35■□□□□ 0.69
RTN1-209ENST00000611068 C5P01031 1676 aa19.34■□□□□ 0.69
RTN1-209ENST00000611068 RAB3GAP1Q15042 981 aa19.34■□□□□ 0.69
RTN1-209ENST00000611068 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
RTN1-209ENST00000611068 MYD88Q99836 296 aa19.34■□□□□ 0.69
RTN1-209ENST00000611068 ADAMTS7Q9UKP4 1686 aa19.34■□□□□ 0.69
RTN1-209ENST00000611068 MYRIPQ8NFW9 859 aa19.34■□□□□ 0.69
RTN1-209ENST00000611068 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
RTN1-209ENST00000611068 NBPF26B4DH59 902 aa19.33■□□□□ 0.69
RTN1-209ENST00000611068 NBPF14Q5TI25 921 aa19.33■□□□□ 0.69
RTN1-209ENST00000611068 NBPF10Q6P3W6 841 aaKnown RBP19.33■□□□□ 0.69
RTN1-209ENST00000611068 NBPF15Q8N660 670 aa19.33■□□□□ 0.69
RTN1-209ENST00000611068 CHMP4AQ9BY43 222 aa19.33■□□□□ 0.69
RTN1-209ENST00000611068 RBSNQ9H1K0 784 aa19.33■□□□□ 0.69
RTN1-209ENST00000611068 PRIM1P49642 420 aaKnown RBP19.33■□□□□ 0.68
RTN1-209ENST00000611068 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
RTN1-209ENST00000611068 IRX5P78411 483 aaPredicted RBP19.32■□□□□ 0.68
RTN1-209ENST00000611068 FOXD4L1Q9NU39 408 aa19.32■□□□□ 0.68
RTN1-209ENST00000611068 HMMRO75330 724 aa19.32■□□□□ 0.68
RTN1-209ENST00000611068 SRGAP3O43295 1099 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 ATP8B2P98198 1209 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 TAF3Q5VWG9 929 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 ANKRD13DQ6ZTN6 518 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
RTN1-209ENST00000611068 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 FAM98CQ17RN3 349 aaKnown RBP19.31■□□□□ 0.68
RTN1-209ENST00000611068 IL1RAPL2Q9NP60 686 aa19.31■□□□□ 0.68
RTN1-209ENST00000611068 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
RTN1-209ENST00000611068 COL14A1Q05707 1796 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms