RNA–Protein interactions for RNA: ENST00000610509.1

NPRL3-210, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-210ENST00000610509 CRB1P82279 1406 aa15.82■□□□□ 0.12
NPRL3-210ENST00000610509 ME3Q16798 604 aa15.82■□□□□ 0.12
NPRL3-210ENST00000610509 PLA2G4DQ86XP0 818 aa15.82■□□□□ 0.12
NPRL3-210ENST00000610509 DNAJC25Q9H1X3 360 aa15.82■□□□□ 0.12
NPRL3-210ENST00000610509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.81■□□□□ 0.12
NPRL3-210ENST00000610509 GNAI3P08754 354 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 PTH1RQ03431 593 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 TAF3Q5VWG9 929 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 PDE4CQ08493 712 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 CEP135Q66GS9 1140 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 NPHP1O15259 732 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 SURF6O75683 361 aaKnown RBP15.81■□□□□ 0.12
NPRL3-210ENST00000610509 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
NPRL3-210ENST00000610509 PDRG1Q9NUG6 133 aa15.81■□□□□ 0.12
NPRL3-210ENST00000610509 SOS1Q07889 1333 aaPredicted RBP15.8■□□□□ 0.12
NPRL3-210ENST00000610509 IRX5P78411 483 aaPredicted RBP15.8■□□□□ 0.12
NPRL3-210ENST00000610509 FBXO38Q6PIJ6 1188 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 KRT85P78386 507 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 ELF2Q15723 593 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 KRT222Q8N1A0 295 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 TCEANC2Q96MN5 208 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 SLC52A1Q9NWF4 448 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 PAXBP1Q9Y5B6 917 aa15.8■□□□□ 0.12
NPRL3-210ENST00000610509 FBXO31Q5XUX0 539 aaPredicted RBP15.79■□□□□ 0.12
NPRL3-210ENST00000610509 LARP1BQ659C4 914 aaKnown RBP15.79■□□□□ 0.12
NPRL3-210ENST00000610509 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
NPRL3-210ENST00000610509 USP44Q9H0E7 712 aa15.79■□□□□ 0.12
NPRL3-210ENST00000610509 ALKQ9UM73 1620 aa15.79■□□□□ 0.12
NPRL3-210ENST00000610509 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
NPRL3-210ENST00000610509 ZNF165P49910 485 aa15.79■□□□□ 0.12
NPRL3-210ENST00000610509 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
NPRL3-210ENST00000610509 NR1I2O75469 434 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 TRMT1Q9NXH9 659 aaKnown RBP15.78■□□□□ 0.12
NPRL3-210ENST00000610509 TPCN1Q9ULQ1 816 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 ERBB3P21860 1342 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 AOX1Q06278 1338 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 A0A087WWV3 80 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 EPB41L2O43491 1005 aaKnown RBP15.78■□□□□ 0.12
NPRL3-210ENST00000610509 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
NPRL3-210ENST00000610509 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
NPRL3-210ENST00000610509 RHPN1Q8TCX5 695 aa15.78■□□□□ 0.12
NPRL3-210ENST00000610509 UBTFL1P0CB47 393 aaPredicted RBP15.77■□□□□ 0.12
NPRL3-210ENST00000610509 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
NPRL3-210ENST00000610509 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.11
NPRL3-210ENST00000610509 CNTROBQ8N137 903 aa15.77■□□□□ 0.11
NPRL3-210ENST00000610509 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.11
NPRL3-210ENST00000610509 WASLO00401 505 aaPredicted RBP15.76■□□□□ 0.11
NPRL3-210ENST00000610509 VPS53Q5VIR6 699 aa15.76■□□□□ 0.11
NPRL3-210ENST00000610509 NUDT16Q96DE0 195 aaKnown RBP15.76■□□□□ 0.11
NPRL3-210ENST00000610509 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
NPRL3-210ENST00000610509 SSH3Q8TE77 659 aa15.76■□□□□ 0.11
NPRL3-210ENST00000610509 SPATA32Q96LK8 384 aa15.76■□□□□ 0.11
NPRL3-210ENST00000610509 ZNF446Q9NWS9 450 aa15.76■□□□□ 0.11
NPRL3-210ENST00000610509 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
NPRL3-210ENST00000610509 MLECQ14165 292 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 TRERF1Q96PN7 1200 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 TTC21AQ8NDW8 1320 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 TMEM131LA2VDJ0 1609 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 SYTL4Q96C24 671 aaPredicted RBP15.75■□□□□ 0.11
NPRL3-210ENST00000610509 CLSTN2Q9H4D0 955 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 ZSWIM6Q9HCJ5 1215 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 MAP3K19Q56UN5 1328 aa15.75■□□□□ 0.11
NPRL3-210ENST00000610509 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 PTPN14Q15678 1187 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 PGBD1Q96JS3 809 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 C11orf57Q6ZUT1 292 aaPredicted RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 BICD2Q8TD16 824 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 LEO1Q8WVC0 666 aaPredicted RBP15.74■□□□□ 0.11
NPRL3-210ENST00000610509 ELP1O95163 1332 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 RAB11FIP3O75154 756 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 SKILP12757 684 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 NYAP1Q6ZVC0 841 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 LRRN4CLQ8ND94 238 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
NPRL3-210ENST00000610509 RBM43Q6ZSC3 357 aaKnown RBP15.73■□□□□ 0.11
NPRL3-210ENST00000610509 CCDC66A2RUB6 948 aa15.73■□□□□ 0.11
NPRL3-210ENST00000610509 STK3Q13188 491 aa15.73■□□□□ 0.11
NPRL3-210ENST00000610509 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
NPRL3-210ENST00000610509 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
NPRL3-210ENST00000610509 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
NPRL3-210ENST00000610509 DDX19AQ9NUU7 478 aaKnown RBP15.73■□□□□ 0.11
NPRL3-210ENST00000610509 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
NPRL3-210ENST00000610509 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
NPRL3-210ENST00000610509 TIGD1Q96MW7 591 aa15.72■□□□□ 0.11
NPRL3-210ENST00000610509 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
NPRL3-210ENST00000610509 FAM53CQ9NYF3 392 aa15.72■□□□□ 0.11
NPRL3-210ENST00000610509 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
NPRL3-210ENST00000610509 NBPF7P0C2Y1 421 aaPredicted RBP15.71■□□□□ 0.11
NPRL3-210ENST00000610509 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 1433.4 ms