RNA–Protein interactions for RNA: ENST00000609284.1

NUP50-AS1-203, humanhuman

TSL 1 (best)

Gene NUP50-AS1, Length 710 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-AS1-203ENST00000609284 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
NUP50-AS1-203ENST00000609284 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
NUP50-AS1-203ENST00000609284 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
NUP50-AS1-203ENST00000609284 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
NUP50-AS1-203ENST00000609284 COL15A1P39059 1388 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 LOC102724428A0A0B4J2F2 783 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 SIK1P57059 783 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 COPS6Q7L5N1 327 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 DDX60Q8IY21 1712 aaKnown RBP11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
NUP50-AS1-203ENST00000609284 GNAI2P04899 355 aa11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 CEP85Q6P2H3 762 aa11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 UTYO14607 1347 aa11.3□□□□□ -0.6
NUP50-AS1-203ENST00000609284 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 KCNQ2O43526 872 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 A1BGP04217 495 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
NUP50-AS1-203ENST00000609284 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 HMMRO75330 724 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 GCC1Q96CN9 775 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 HDAC5Q9UQL6 1122 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
NUP50-AS1-203ENST00000609284 LRP5O75197 1615 aa11.27□□□□□ -0.6
NUP50-AS1-203ENST00000609284 GRM8O00222 908 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 IGKV5-2P06315 115 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ITPK1Q13572 414 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 MAP3K15Q6ZN16 1313 aa11.27□□□□□ -0.61
NUP50-AS1-203ENST00000609284 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CRKLP46109 303 aaKnown RBP11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 MTX1Q13505 466 aa11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 GCKRQ14397 625 aa11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 MYD88Q99836 296 aa11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
NUP50-AS1-203ENST00000609284 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
NUP50-AS1-203ENST00000609284 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
NUP50-AS1-203ENST00000609284 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
NUP50-AS1-203ENST00000609284 EP400Q96L91 3159 aa11.25□□□□□ -0.61
NUP50-AS1-203ENST00000609284 RGL2O15211 777 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 EIF5P55010 431 aaKnown RBP11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 NUCB1Q02818 461 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ERVV-1B6SEH8 477 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 POLA2Q14181 598 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CCDC191Q8NCU4 936 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CWC25Q9NXE8 425 aaPredicted RBP11.23□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CASP7P55210 303 aa11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ATP8B2P98198 1209 aa11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 TCIRG1Q13488 830 aa11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
NUP50-AS1-203ENST00000609284 A0A087WZG4 1122 aa11.21□□□□□ -0.61
NUP50-AS1-203ENST00000609284 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
NUP50-AS1-203ENST00000609284 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
NUP50-AS1-203ENST00000609284 SUCLG2Q96I99 432 aa11.21□□□□□ -0.61
NUP50-AS1-203ENST00000609284 CDHR2Q9BYE9 1310 aa11.2□□□□□ -0.62
NUP50-AS1-203ENST00000609284 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
NUP50-AS1-203ENST00000609284 RGS3P49796 1198 aa11.2□□□□□ -0.62
NUP50-AS1-203ENST00000609284 RABL6Q3YEC7 729 aaPredicted RBP11.2□□□□□ -0.62
NUP50-AS1-203ENST00000609284 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
NUP50-AS1-203ENST00000609284 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms