RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 RNMTO43148 476 aaKnown RBP25.7■■□□□ 1.7
SGMS1-208ENST00000608287 EIF5P55010 431 aaKnown RBP25.7■■□□□ 1.7
SGMS1-208ENST00000608287 PRR5LQ6MZQ0 368 aa25.7■■□□□ 1.7
SGMS1-208ENST00000608287 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.7
SGMS1-208ENST00000608287 TAF1DQ9H5J8 278 aaPredicted RBP25.7■■□□□ 1.7
SGMS1-208ENST00000608287 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
SGMS1-208ENST00000608287 CNBD1Q8NA66 436 aa25.69■■□□□ 1.7
SGMS1-208ENST00000608287 ABHD8Q96I13 439 aa25.69■■□□□ 1.7
SGMS1-208ENST00000608287 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
SGMS1-208ENST00000608287 DDX10Q13206 875 aaKnown RBP25.68■■□□□ 1.7
SGMS1-208ENST00000608287 TBC1D9BQ66K14 1250 aa25.68■■□□□ 1.7
SGMS1-208ENST00000608287 PNMA8AQ86V59 439 aaPredicted RBP25.68■■□□□ 1.7
SGMS1-208ENST00000608287 MASTLQ96GX5 879 aa25.68■■□□□ 1.7
SGMS1-208ENST00000608287 FAM161AQ3B820 660 aa25.67■■□□□ 1.7
SGMS1-208ENST00000608287 PRPF40BQ6NWY9 871 aaKnown RBP25.67■■□□□ 1.7
SGMS1-208ENST00000608287 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
SGMS1-208ENST00000608287 LGR6Q9HBX8 967 aa25.67■■□□□ 1.7
SGMS1-208ENST00000608287 RASSF10A6NK89 507 aa25.66■■□□□ 1.7
SGMS1-208ENST00000608287 DEFB115Q30KQ5 88 aa25.66■■□□□ 1.7
SGMS1-208ENST00000608287 HACL1Q9UJ83 578 aa25.66■■□□□ 1.7
SGMS1-208ENST00000608287 CACNA1SQ13698 1873 aa25.66■■□□□ 1.7
SGMS1-208ENST00000608287 ITGBL1O95965 494 aaPredicted RBP25.65■■□□□ 1.7
SGMS1-208ENST00000608287 CCDC93Q567U6 631 aa25.65■■□□□ 1.7
SGMS1-208ENST00000608287 EAPPQ56P03 285 aaPredicted RBP25.65■■□□□ 1.7
SGMS1-208ENST00000608287 BEGAINQ9BUH8 593 aa25.65■■□□□ 1.7
SGMS1-208ENST00000608287 CLEC11AQ9Y240 323 aa25.65■■□□□ 1.7
SGMS1-208ENST00000608287 SLX4Q8IY92 1834 aa25.65■■□□□ 1.7
SGMS1-208ENST00000608287 SRGNP10124 158 aa25.64■■□□□ 1.7
SGMS1-208ENST00000608287 HSPA8P11142 646 aaKnown RBP25.63■■□□□ 1.69
SGMS1-208ENST00000608287 IL6STP40189 918 aaPredicted RBP25.63■■□□□ 1.69
SGMS1-208ENST00000608287 MLLT1Q03111 559 aaPredicted RBP25.63■■□□□ 1.69
SGMS1-208ENST00000608287 EPHX2P34913 555 aa25.61■■□□□ 1.69
SGMS1-208ENST00000608287 NUDCQ9Y266 331 aa25.61■■□□□ 1.69
SGMS1-208ENST00000608287 ZNF330Q9Y3S2 320 aaPredicted RBP25.61■■□□□ 1.69
SGMS1-208ENST00000608287 WDR33Q9C0J8 1336 aaKnown RBP25.61■■□□□ 1.69
SGMS1-208ENST00000608287 ABT1Q9ULW3 272 aaKnown RBP25.6■■□□□ 1.69
SGMS1-208ENST00000608287 ADAMTSL1Q8N6G6 1762 aa25.59■■□□□ 1.69
SGMS1-208ENST00000608287 FKBP4Q02790 459 aaKnown RBP eCLIP25.59■■□□□ 1.69
SGMS1-208ENST00000608287 HEG1Q9ULI3 1381 aa25.58■■□□□ 1.69
SGMS1-208ENST00000608287 ECE1P42892 770 aa25.58■■□□□ 1.69
SGMS1-208ENST00000608287 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
SGMS1-208ENST00000608287 RTKN2Q8IZC4 609 aa25.58■■□□□ 1.69
SGMS1-208ENST00000608287 CNTROBQ8N137 903 aa25.58■■□□□ 1.69
SGMS1-208ENST00000608287 TBC1D2BQ9UPU7 963 aa25.58■■□□□ 1.69
SGMS1-208ENST00000608287 NPR1P16066 1061 aa25.56■■□□□ 1.68
SGMS1-208ENST00000608287 TEFQ10587 303 aa25.56■■□□□ 1.68
SGMS1-208ENST00000608287 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
SGMS1-208ENST00000608287 ZNF652Q9Y2D9 606 aa25.56■■□□□ 1.68
SGMS1-208ENST00000608287 U2AF1L5P0DN76 240 aaPredicted RBP25.55■■□□□ 1.68
SGMS1-208ENST00000608287 RGS19P49795 217 aa25.55■■□□□ 1.68
SGMS1-208ENST00000608287 U2AF1Q01081 240 aaKnown RBP eCLIP25.55■■□□□ 1.68
SGMS1-208ENST00000608287 GPC2Q8N158 579 aa25.55■■□□□ 1.68
SGMS1-208ENST00000608287 BCORQ6W2J9 1755 aa25.54■■□□□ 1.68
SGMS1-208ENST00000608287 CCDC85CA6NKD9 419 aa25.54■■□□□ 1.68
SGMS1-208ENST00000608287 ZNF790Q6PG37 636 aa25.54■■□□□ 1.68
SGMS1-208ENST00000608287 NBPF5PQ86XG9 351 aaPredicted RBP25.54■■□□□ 1.68
SGMS1-208ENST00000608287 THSD7BQ9C0I4 1608 aa25.54■■□□□ 1.68
SGMS1-208ENST00000608287 CAMTA2O94983 1202 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 RALBP1Q15311 655 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 CLEC4GQ6UXB4 293 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 C7orf43Q8WVR3 580 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 ZNF496Q96IT1 587 aaPredicted RBP25.53■■□□□ 1.68
SGMS1-208ENST00000608287 FMNL2Q96PY5 1086 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 ZNF541Q9H0D2 1346 aa25.53■■□□□ 1.68
SGMS1-208ENST00000608287 PRKAR2BP31323 418 aa25.52■■□□□ 1.68
SGMS1-208ENST00000608287 MAP1SQ66K74 1059 aaPredicted RBP25.52■■□□□ 1.68
SGMS1-208ENST00000608287 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
SGMS1-208ENST00000608287 RNF123Q5XPI4 1314 aa25.52■■□□□ 1.68
SGMS1-208ENST00000608287 LMOD1P29536 600 aaPredicted RBP25.51■■□□□ 1.67
SGMS1-208ENST00000608287 DZIP3Q86Y13 1208 aaKnown RBP25.51■■□□□ 1.67
SGMS1-208ENST00000608287 GAS2L2Q8NHY3 880 aa25.51■■□□□ 1.67
SGMS1-208ENST00000608287 JDP2Q8WYK2 163 aa25.51■■□□□ 1.67
SGMS1-208ENST00000608287 ZNF277Q9NRM2 450 aaPredicted RBP25.51■■□□□ 1.67
SGMS1-208ENST00000608287 FZD9O00144 591 aa25.5■■□□□ 1.67
SGMS1-208ENST00000608287 RGL2O15211 777 aa25.5■■□□□ 1.67
SGMS1-208ENST00000608287 ALDH1B1P30837 517 aa25.5■■□□□ 1.67
SGMS1-208ENST00000608287 IARSP41252 1262 aaKnown RBP25.5■■□□□ 1.67
SGMS1-208ENST00000608287 PAXIP1Q6ZW49 1069 aaPredicted RBP25.5■■□□□ 1.67
SGMS1-208ENST00000608287 DDX21Q9NR30 783 aaKnown RBP eCLIP25.5■■□□□ 1.67
SGMS1-208ENST00000608287 CA12O43570 354 aa25.49■■□□□ 1.67
SGMS1-208ENST00000608287 TPTE2Q6XPS3 522 aa25.49■■□□□ 1.67
SGMS1-208ENST00000608287 PHACTR3Q96KR7 559 aa25.48■■□□□ 1.67
SGMS1-208ENST00000608287 CAPNS2Q96L46 248 aa25.48■■□□□ 1.67
SGMS1-208ENST00000608287 KLRG2A4D1S0 409 aaPredicted RBP25.47■■□□□ 1.67
SGMS1-208ENST00000608287 EIF6P56537 245 aaKnown RBP25.47■■□□□ 1.67
SGMS1-208ENST00000608287 GNAT3A8MTJ3 354 aa25.46■■□□□ 1.67
SGMS1-208ENST00000608287 GPR101Q96P66 508 aaPredicted RBP25.46■■□□□ 1.67
SGMS1-208ENST00000608287 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
SGMS1-208ENST00000608287 TRPM7Q96QT4 1865 aa25.45■■□□□ 1.67
SGMS1-208ENST00000608287 MAP2K2P36507 400 aa25.45■■□□□ 1.66
SGMS1-208ENST00000608287 GRIPAP1Q4V328 841 aa25.45■■□□□ 1.66
SGMS1-208ENST00000608287 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
SGMS1-208ENST00000608287 PSMD1Q99460 953 aa25.45■■□□□ 1.66
SGMS1-208ENST00000608287 A1BGP04217 495 aa25.44■■□□□ 1.66
SGMS1-208ENST00000608287 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
SGMS1-208ENST00000608287 SYNE4Q8N205 404 aa25.43■■□□□ 1.66
SGMS1-208ENST00000608287 USP50Q70EL3 339 aaPredicted RBP25.41■■□□□ 1.66
SGMS1-208ENST00000608287 GTF2E1P29083 439 aaPredicted RBP25.4■■□□□ 1.66
SGMS1-208ENST00000608287 IL17REQ8NFR9 667 aa25.4■■□□□ 1.66
SGMS1-208ENST00000608287 CFAP44Q96MT7 982 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms