RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
LINC00963-210ENST00000608272 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
LINC00963-210ENST00000608272 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
LINC00963-210ENST00000608272 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
LINC00963-210ENST00000608272 THSD7BQ9C0I4 1608 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 ECE1P42892 770 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00963-210ENST00000608272 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 SLX4Q8IY92 1834 aa17.62■□□□□ 0.41
LINC00963-210ENST00000608272 NPHP1O15259 732 aa17.61■□□□□ 0.41
LINC00963-210ENST00000608272 EPHX2P34913 555 aa17.61■□□□□ 0.41
LINC00963-210ENST00000608272 WDR33Q9C0J8 1336 aaKnown RBP17.61■□□□□ 0.41
LINC00963-210ENST00000608272 HEG1Q9ULI3 1381 aa17.61■□□□□ 0.41
LINC00963-210ENST00000608272 KLRG2A4D1S0 409 aaPredicted RBP17.6■□□□□ 0.41
LINC00963-210ENST00000608272 NPR1P16066 1061 aa17.6■□□□□ 0.41
LINC00963-210ENST00000608272 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
LINC00963-210ENST00000608272 BEGAINQ9BUH8 593 aa17.6■□□□□ 0.41
LINC00963-210ENST00000608272 PANK3Q9H999 370 aa17.6■□□□□ 0.41
LINC00963-210ENST00000608272 FZD9O00144 591 aa17.59■□□□□ 0.41
LINC00963-210ENST00000608272 CA12O43570 354 aa17.59■□□□□ 0.41
LINC00963-210ENST00000608272 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
LINC00963-210ENST00000608272 EAPPQ56P03 285 aaPredicted RBP17.59■□□□□ 0.41
LINC00963-210ENST00000608272 GPC2Q8N158 579 aa17.59■□□□□ 0.41
LINC00963-210ENST00000608272 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
LINC00963-210ENST00000608272 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
LINC00963-210ENST00000608272 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
LINC00963-210ENST00000608272 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
LINC00963-210ENST00000608272 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
LINC00963-210ENST00000608272 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 MAP2K2P36507 400 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
LINC00963-210ENST00000608272 CC2D2BQ6DHV5 1058 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
LINC00963-210ENST00000608272 TEFQ10587 303 aa17.55■□□□□ 0.4
LINC00963-210ENST00000608272 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
LINC00963-210ENST00000608272 PSMD1Q99460 953 aa17.55■□□□□ 0.4
LINC00963-210ENST00000608272 DDX21Q9NR30 783 aaKnown RBP eCLIP17.55■□□□□ 0.4
LINC00963-210ENST00000608272 ABT1Q9ULW3 272 aaKnown RBP17.55■□□□□ 0.4
LINC00963-210ENST00000608272 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
LINC00963-210ENST00000608272 ZNF541Q9H0D2 1346 aa17.54■□□□□ 0.4
LINC00963-210ENST00000608272 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
LINC00963-210ENST00000608272 TPTE2Q6XPS3 522 aa17.54■□□□□ 0.4
LINC00963-210ENST00000608272 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
LINC00963-210ENST00000608272 JDP2Q8WYK2 163 aa17.54■□□□□ 0.4
LINC00963-210ENST00000608272 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
LINC00963-210ENST00000608272 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
LINC00963-210ENST00000608272 HHIPL1Q96JK4 782 aa17.53■□□□□ 0.4
LINC00963-210ENST00000608272 POLR3GLQ9BT43 218 aa17.53■□□□□ 0.4
LINC00963-210ENST00000608272 LMOD1P29536 600 aaPredicted RBP17.52■□□□□ 0.4
LINC00963-210ENST00000608272 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
LINC00963-210ENST00000608272 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
LINC00963-210ENST00000608272 SIPA1L3O60292 1781 aaPredicted RBP17.52■□□□□ 0.4
LINC00963-210ENST00000608272 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
LINC00963-210ENST00000608272 CLSPNQ9HAW4 1339 aa17.51■□□□□ 0.39
LINC00963-210ENST00000608272 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
LINC00963-210ENST00000608272 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
LINC00963-210ENST00000608272 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
LINC00963-210ENST00000608272 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.391e-7■■■■□ 25.4
LINC00963-210ENST00000608272 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-210ENST00000608272 GPR101Q96P66 508 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-210ENST00000608272 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-210ENST00000608272 ZNF330Q9Y3S2 320 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-210ENST00000608272 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
LINC00963-210ENST00000608272 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
LINC00963-210ENST00000608272 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 HMOX1P09601 288 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 TLL2Q9Y6L7 1015 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 TRPM7Q96QT4 1865 aa17.49■□□□□ 0.39
LINC00963-210ENST00000608272 A1BGP04217 495 aa17.48■□□□□ 0.39
LINC00963-210ENST00000608272 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
LINC00963-210ENST00000608272 VPS33BQ9H267 617 aa17.48■□□□□ 0.39
LINC00963-210ENST00000608272 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
LINC00963-210ENST00000608272 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
LINC00963-210ENST00000608272 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
LINC00963-210ENST00000608272 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
LINC00963-210ENST00000608272 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
LINC00963-210ENST00000608272 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
LINC00963-210ENST00000608272 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC00963-210ENST00000608272 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
LINC00963-210ENST00000608272 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
LINC00963-210ENST00000608272 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
LINC00963-210ENST00000608272 SNRPA1P09661 255 aaKnown RBP17.43■□□□□ 0.38
LINC00963-210ENST00000608272 HOXA10P31260 410 aaPredicted RBP17.43■□□□□ 0.38
LINC00963-210ENST00000608272 SCNN1DP51172 638 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 CST9Q5W186 159 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
LINC00963-210ENST00000608272 MCOLN1Q9GZU1 580 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 PDE4DIPQ5VU43 2346 aa17.43■□□□□ 0.38
LINC00963-210ENST00000608272 SAPCD2Q86UD0 394 aa17.42■□□□□ 0.38
LINC00963-210ENST00000608272 ZC3H15Q8WU90 426 aaKnown RBP17.42■□□□□ 0.38
LINC00963-210ENST00000608272 ADARB2Q9NS39 739 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms