RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 PI4KAP2A4QPH2 592 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 SURF6O75683 361 aaKnown RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 WASHC4Q2M389 1173 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 PI4KAP1Q8N8J0 262 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 UPF1Q92900 1129 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 TRIM6-TRIM34B2RNG4 842 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 IRS4O14654 1257 aaPredicted RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 PLSCR1O15162 318 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 CHAF1AQ13111 956 aaPredicted RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 CCDC184Q52MB2 194 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 SAMD1Q6SPF0 538 aaPredicted RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 UBE3BQ7Z3V4 1068 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 ZSCAN29Q8IWY8 852 aaPredicted RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 SLF2Q8IX21 1173 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 NIM1KQ8IY84 436 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 AKAP2Q9Y2D5 859 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
SCARNA15-201ENST00000607520 KSR2Q6VAB6 950 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 NAP1L2Q9ULW6 460 aaPredicted RBP6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 TTC39AQ5SRH9 613 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 DPP8Q6V1X1 898 aaPredicted RBP6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 TTLL6Q8N841 843 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 IL17REQ8NFR9 667 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 PLBD2Q8NHP8 589 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 ZBTB1Q9Y2K1 713 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 SLC5A1P13866 664 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 GRM1Q13255 1194 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 ANKRD2Q9GZV1 360 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 ATG3Q9NT62 314 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 KIF1AQ12756 1690 aa6.32□□□□□ -1.4
SCARNA15-201ENST00000607520 RAD21O60216 631 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 APPP05067 770 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 ZNF526Q8TF50 670 aaPredicted RBP6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 SIL1Q9H173 461 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 PPLO60437 1756 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 PARD3Q8TEW0 1356 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 ERC2O15083 957 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 ALDH1L2Q3SY69 923 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 RC3H1Q5TC82 1133 aaKnown RBP6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 COG6Q9Y2V7 657 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 NOB1Q9ULX3 412 aaKnown RBP6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 USP16Q9Y5T5 823 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 H7C1D1 291 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 CCDC24Q8N4L8 307 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 NARFQ9UHQ1 456 aa6.31□□□□□ -1.4
SCARNA15-201ENST00000607520 PTPRCP08575 1304 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 PPIP5K2O43314 1243 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ALDH1L1O75891 902 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 MCCP23508 829 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 MPNDQ8N594 471 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 QRICH2Q9H0J4 1663 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 FANCIQ9NVI1 1328 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 LDHCP07864 332 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 EIF4A1P60842 406 aaKnown RBP6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 EAPPQ56P03 285 aaPredicted RBP6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 CLEC4GQ6UXB4 293 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ZNF804AQ7Z570 1209 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 CCDC191Q8NCU4 936 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ADGRB1O14514 1584 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 RGS3P49796 1198 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 RBM26Q5T8P6 1007 aaKnown RBP6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 TMC4Q7Z404 712 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ARHGEF1Q92888 912 aaKnown RBP6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 RAI14Q9P0K7 980 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 LRP2BPQ9P2M1 347 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ABCF2Q9UG63 623 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
SCARNA15-201ENST00000607520 ROBO1Q9Y6N7 1651 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 CDK12Q9NYV4 1490 aaPredicted RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 RIMBP2O15034 1052 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 GIGYF1O75420 1035 aaPredicted RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 HCLS1P14317 486 aaPredicted RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 ATF7IPQ6VMQ6 1270 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 SRP68Q9UHB9 627 aaKnown RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 F6X3S4 739 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 PDE8AO60658 829 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 DZIP1Q86YF9 867 aaKnown RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 SIGLEC1Q9BZZ2 1709 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 CHL1O00533 1208 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 SPTY2D1Q68D10 685 aaPredicted RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 CDCA7LQ96GN5 454 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 CD163L1Q9NR16 1453 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 MAP3K15Q6ZN16 1313 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 UFL1O94874 794 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 SLC3A2P08195 630 aaKnown RBP6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 NPR1P16066 1061 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 RTKN2Q8IZC4 609 aa6.29□□□□□ -1.4
SCARNA15-201ENST00000607520 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms