RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 ATF5Q9Y2D1 282 aaPredicted RBP8.55□□□□□ -1.04
CDC40-207ENST00000606893 TAF7LQ5H9L4 462 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
CDC40-207ENST00000606893 API5Q9BZZ5 524 aaKnown RBP8.55□□□□□ -1.04
CDC40-207ENST00000606893 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
CDC40-207ENST00000606893 PI4KAP2A4QPH2 592 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 ZBTB7AO95365 584 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
CDC40-207ENST00000606893 ITPK1Q13572 414 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 PI4KAP1Q8N8J0 262 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 NRKQ7Z2Y5 1582 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 VAMP4O75379 141 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 LRRC4BQ9NT99 713 aa8.54□□□□□ -1.04
CDC40-207ENST00000606893 COL3A1P02461 1466 aaPredicted RBP8.54□□□□□ -1.04
CDC40-207ENST00000606893 CHL1O00533 1208 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 R3HDM1Q15032 1099 aaKnown RBP8.53□□□□□ -1.04
CDC40-207ENST00000606893 AK7Q96M32 723 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.044e-6■■■□□ 19.1
CDC40-207ENST00000606893 ALS2Q96Q42 1657 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 GOLGA6L3A6NEY3 463 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 TRAK2O60296 914 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 GIGYF1O75420 1035 aaPredicted RBP8.53□□□□□ -1.04
CDC40-207ENST00000606893 ALDH1L2Q3SY69 923 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CDC40-207ENST00000606893 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 SSFA2P28290 1259 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 FOSBP53539 338 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 TXNRD1Q16881 649 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 MCTP1Q6DN14 999 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 MYD88Q99836 296 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 KDM6AO15550 1401 aaPredicted RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 CRKLP46109 303 aaKnown RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 TRMT2AQ8IZ69 625 aaKnown RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 NHSL1Q5SYE7 1610 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 PKP1Q13835 747 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
CDC40-207ENST00000606893 DDX19BQ9UMR2 479 aa8.52□□□□□ -1.05
CDC40-207ENST00000606893 KDRP35968 1356 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 SLIT2O94813 1529 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 BARGINQ6ZT62 677 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
CDC40-207ENST00000606893 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 KDM4AO75164 1064 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 STARD3NLO95772 234 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 LINC00116Q8NCU8 138 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 THRAP3Q9Y2W1 955 aaKnown RBP8.51□□□□□ -1.05
CDC40-207ENST00000606893 SLIT3O75094 1523 aa8.51□□□□□ -1.05
CDC40-207ENST00000606893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 NBPF26B4DH59 902 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 RFC4P35249 363 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 FLIIQ13045 1269 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 HLFQ16534 295 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 NBPF14Q5TI25 921 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 BABAM1Q9NWV8 329 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 DDX49Q9Y6V7 483 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 DDX58O95786 925 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 MEIS3Q99687 375 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 SIL1Q9H173 461 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 PRDM10Q9NQV6 1147 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 PHRF1Q9P1Y6 1649 aaKnown RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 CHD1LQ86WJ1 897 aa8.5□□□□□ -1.05
CDC40-207ENST00000606893 C9orf78Q9NZ63 289 aaPredicted RBP8.5□□□□□ -1.05
CDC40-207ENST00000606893 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 OS9Q13438 667 aaPredicted RBP8.49□□□□□ -1.05
CDC40-207ENST00000606893 USPL1Q5W0Q7 1092 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
CDC40-207ENST00000606893 PROM2Q8N271 834 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 KLHDC4Q8TBB5 520 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 OVOS2A0A0G2JMS6 1433 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 PCNTO95613 3336 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 VGLL3A8MV65 326 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC40-207ENST00000606893 HCLS1P14317 486 aaPredicted RBP8.49□□□□□ -1.05
CDC40-207ENST00000606893 MCM4P33991 863 aa8.49□□□□□ -1.05
CDC40-207ENST00000606893 CAVIN1Q6NZI2 390 aaKnown RBP8.49□□□□□ -1.05
CDC40-207ENST00000606893 ZPR1O75312 459 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 BAG6P46379 1132 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 TBC1D32Q96NH3 1257 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 ZNF853P0CG23 659 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 TBC1D9Q6ZT07 1266 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
CDC40-207ENST00000606893 RGS12O14924 1447 aa8.48□□□□□ -1.05
CDC40-207ENST00000606893 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
CDC40-207ENST00000606893 CPA1P15085 419 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 CLCN1P35523 988 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 ANKRD13DQ6ZTN6 518 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms