RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 LRP10Q7Z4F1 713 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 LAMB4A4D0S4 1761 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 IL27Q8NEV9 243 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 USP16Q9Y5T5 823 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 CD2BP2O95400 341 aaKnown RBP24.26■■□□□ 1.47
MMP28-201ENST00000605424 IGKV5-2P06315 115 aa24.26■■□□□ 1.47
MMP28-201ENST00000605424 MYL6BP14649 208 aa24.26■■□□□ 1.47
MMP28-201ENST00000605424 IL2RBP14784 551 aa24.26■■□□□ 1.47
MMP28-201ENST00000605424 ANKRD13DQ6ZTN6 518 aa24.26■■□□□ 1.47
MMP28-201ENST00000605424 CLASRPQ8N2M8 674 aaKnown RBP24.26■■□□□ 1.47
MMP28-201ENST00000605424 PI4K2BQ8TCG2 481 aa24.26■■□□□ 1.47
MMP28-201ENST00000605424 NEURL1BA8MQ27 555 aa24.25■■□□□ 1.47
MMP28-201ENST00000605424 ST18O60284 1047 aa24.25■■□□□ 1.47
MMP28-201ENST00000605424 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
MMP28-201ENST00000605424 OS9Q13438 667 aaPredicted RBP24.25■■□□□ 1.47
MMP28-201ENST00000605424 NUTM1Q86Y26 1132 aa24.25■■□□□ 1.47
MMP28-201ENST00000605424 MCCP23508 829 aa24.25■■□□□ 1.47
MMP28-201ENST00000605424 SUCLG2Q96I99 432 aa24.24■■□□□ 1.47
MMP28-201ENST00000605424 MCM4P33991 863 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 ANAPC15P60006 121 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 GCKRQ14397 625 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 GLI3P10071 1580 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 COL15A1P39059 1388 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 KAZALD1Q96I82 304 aa24.23■■□□□ 1.47
MMP28-201ENST00000605424 GLRX3O76003 335 aaKnown RBP24.22■■□□□ 1.47
MMP28-201ENST00000605424 CNTROBQ8N137 903 aa24.22■■□□□ 1.47
MMP28-201ENST00000605424 IL17RAQ96F46 866 aa24.22■■□□□ 1.47
MMP28-201ENST00000605424 GPATCH3Q96I76 525 aa24.22■■□□□ 1.47
MMP28-201ENST00000605424 BICC1Q9H694 974 aaKnown RBP24.22■■□□□ 1.47
MMP28-201ENST00000605424 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
MMP28-201ENST00000605424 EVA1CP58658 441 aa24.21■■□□□ 1.47
MMP28-201ENST00000605424 MYD88Q99836 296 aa24.21■■□□□ 1.47
MMP28-201ENST00000605424 UNC5CLQ8IV45 518 aa24.2■■□□□ 1.46
MMP28-201ENST00000605424 PLBD2Q8NHP8 589 aa24.2■■□□□ 1.46
MMP28-201ENST00000605424 AK9Q5TCS8 1911 aa24.19■■□□□ 1.46
MMP28-201ENST00000605424 G3BP1Q13283 466 aaKnown RBP eCLIP24.19■■□□□ 1.46
MMP28-201ENST00000605424 RAB3GAP1Q15042 981 aa24.19■■□□□ 1.46
MMP28-201ENST00000605424 PAPPAQ13219 1627 aa24.19■■□□□ 1.46
MMP28-201ENST00000605424 ECHDC1Q9NTX5 307 aa24.18■■□□□ 1.46
MMP28-201ENST00000605424 DDX11L8A8MPP1 907 aa24.18■■□□□ 1.46
MMP28-201ENST00000605424 MCM2P49736 904 aa24.18■■□□□ 1.46
MMP28-201ENST00000605424 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
MMP28-201ENST00000605424 IFIT2P09913 472 aaKnown RBP24.17■■□□□ 1.46
MMP28-201ENST00000605424 ANO2Q9NQ90 1003 aa24.17■■□□□ 1.46
MMP28-201ENST00000605424 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
MMP28-201ENST00000605424 CWC22Q9HCG8 908 aaKnown RBP24.16■■□□□ 1.46
MMP28-201ENST00000605424 PA2G4Q9UQ80 394 aaKnown RBP24.16■■□□□ 1.46
MMP28-201ENST00000605424 COL22A1Q8NFW1 1626 aaPredicted RBP24.16■■□□□ 1.46
MMP28-201ENST00000605424 KCPQ6ZWJ8 1503 aa24.15■■□□□ 1.46
MMP28-201ENST00000605424 TNS2Q63HR2 1409 aa24.15■■□□□ 1.46
MMP28-201ENST00000605424 PTMSP20962 102 aa24.15■■□□□ 1.46
MMP28-201ENST00000605424 GBP4Q96PP9 640 aa24.15■■□□□ 1.46
MMP28-201ENST00000605424 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
MMP28-201ENST00000605424 FBXO41Q8TF61 875 aa24.14■■□□□ 1.46
MMP28-201ENST00000605424 SGSM2O43147 1006 aa24.14■■□□□ 1.45
MMP28-201ENST00000605424 SASH1O94885 1247 aa24.13■■□□□ 1.45
MMP28-201ENST00000605424 RABL6Q3YEC7 729 aaPredicted RBP24.13■■□□□ 1.45
MMP28-201ENST00000605424 TNPO1Q92973 898 aaKnown RBP24.13■■□□□ 1.45
MMP28-201ENST00000605424 COPRSQ9NQ92 184 aa24.13■■□□□ 1.45
MMP28-201ENST00000605424 AFDNP55196 1824 aaKnown RBP24.13■■□□□ 1.45
MMP28-201ENST00000605424 DDX54Q8TDD1 881 aaKnown RBP24.12■■□□□ 1.45
MMP28-201ENST00000605424 RUFY2Q8WXA3 655 aa24.12■■□□□ 1.45
MMP28-201ENST00000605424 JCADQ9P266 1359 aa24.12■■□□□ 1.45
MMP28-201ENST00000605424 CLEC17AQ6ZS10 378 aa24.12■■□□□ 1.45
MMP28-201ENST00000605424 AACSQ86V21 672 aa24.12■■□□□ 1.45
MMP28-201ENST00000605424 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
MMP28-201ENST00000605424 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
MMP28-201ENST00000605424 NBPF26B4DH59 902 aa24.11■■□□□ 1.45
MMP28-201ENST00000605424 NUCB2P80303 420 aa24.11■■□□□ 1.45
MMP28-201ENST00000605424 NBPF14Q5TI25 921 aa24.11■■□□□ 1.45
MMP28-201ENST00000605424 NBPF10Q6P3W6 841 aaKnown RBP24.11■■□□□ 1.45
MMP28-201ENST00000605424 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
MMP28-201ENST00000605424 NBPF15Q8N660 670 aa24.11■■□□□ 1.45
MMP28-201ENST00000605424 HSPA4P34932 840 aa24.1■■□□□ 1.45
MMP28-201ENST00000605424 EVI5LQ96CN4 794 aa24.1■■□□□ 1.45
MMP28-201ENST00000605424 NEK4P51957 841 aa24.1■■□□□ 1.45
MMP28-201ENST00000605424 MAP4K4O95819 1239 aaPredicted RBP24.09■■□□□ 1.45
MMP28-201ENST00000605424 PIP4K2AP48426 406 aaPredicted RBP24.09■■□□□ 1.45
MMP28-201ENST00000605424 RAD50Q92878 1312 aa24.09■■□□□ 1.45
MMP28-201ENST00000605424 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
MMP28-201ENST00000605424 A0A087WZG4 1122 aa24.08■■□□□ 1.45
MMP28-201ENST00000605424 HIP1O00291 1037 aa24.08■■□□□ 1.45
MMP28-201ENST00000605424 CASP7P55210 303 aa24.08■■□□□ 1.45
MMP28-201ENST00000605424 EPHA10Q5JZY3 1008 aa24.08■■□□□ 1.45
MMP28-201ENST00000605424 EAF2Q96CJ1 260 aaPredicted RBP24.08■■□□□ 1.45
MMP28-201ENST00000605424 TEX13AQ9BXU3 409 aaPredicted RBP24.08■■□□□ 1.45
MMP28-201ENST00000605424 FOXD4L1Q9NU39 408 aa24.08■■□□□ 1.45
MMP28-201ENST00000605424 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.44
MMP28-201ENST00000605424 TMOD3Q9NYL9 352 aa24.08■■□□□ 1.44
MMP28-201ENST00000605424 H7C1W4 665 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 ADAMTS2O95450 1211 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 RFX5P48382 616 aaPredicted RBP24.07■■□□□ 1.44
MMP28-201ENST00000605424 UBE3BQ7Z3V4 1068 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 DIAPH3Q9NSV4 1193 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 NUP188Q5SRE5 1749 aa24.07■■□□□ 1.44
MMP28-201ENST00000605424 BTG4Q9NY30 223 aa24.06■■□□□ 1.44
MMP28-201ENST00000605424 PALD1Q9ULE6 856 aa24.06■■□□□ 1.44
MMP28-201ENST00000605424 TRAK2O60296 914 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms