RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 PRC1O43663 620 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 RAB3IPQ96QF0 476 aaPredicted RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 CENPJQ9HC77 1338 aaPredicted RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 IFT122Q9HBG6 1241 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 CWC25Q9NXE8 425 aaPredicted RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 CAPZA3Q96KX2 299 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SPAG5Q96R06 1193 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 DTNBO60941 627 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 DDX58O95786 925 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 ZNF165P49910 485 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 LMOD2Q6P5Q4 547 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 CACNA2D3Q8IZS8 1091 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 PPP6R1Q9UPN7 881 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 ARHGAP10A1A4S6 786 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 PLVAPQ9BX97 442 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 FAM184BQ9ULE4 1060 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 HOMER2Q9NSB8 354 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SPECC1L-ADORA2AF8WAN1 911 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SURF6O75683 361 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 CDKL5O76039 1030 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SLC4A2P04920 1241 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 HNRNPH2P55795 449 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 RNASELQ05823 741 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 EID1Q9Y6B2 187 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 NDC80O14777 642 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 PFDN1O60925 122 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 GNAI2P04899 355 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SEC62Q99442 399 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 H7C1D1 291 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SMC6Q96SB8 1091 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 CABS1Q96KC9 395 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SLFN5Q08AF3 891 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 ZNF287Q9HBT7 754 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 KRT85P78386 507 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 STX6O43752 255 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 C6orf118Q5T5N4 469 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SHANK2Q9UPX8 1470 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 CCT4P50991 539 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 SNW1Q13573 536 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 TFIP11Q9UBB9 837 aaKnown RBP3.89□□□□□ -1.79
NEB-219ENST00000604864 CLUAP1Q96AJ1 413 aa3.89□□□□□ -1.79
NEB-219ENST00000604864 SART3Q15020 963 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 CCDC170Q8IYT3 715 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 NACAP1Q9BZK3 213 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 SIL1Q9H173 461 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 NKTRP30414 1462 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 LRRD1A4D1F6 860 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 K7ELQ4 463 aaPredicted RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 NEBLO76041 1014 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 POTEDQ86YR6 584 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 CHMP7Q8WUX9 453 aaPredicted RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 MOV10L1Q9BXT6 1211 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 HDAC1Q13547 482 aaPredicted RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 VCX3AQ9NNX9 186 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 PPP1R2P41236 205 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 VAV2P52735 878 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 MAP3K9P80192 1104 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 FKBP15Q5T1M5 1219 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 CCDC183Q5T5S1 534 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 TMTC1Q8IUR5 882 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 STK24Q9Y6E0 443 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 RASSF8Q8NHQ8 419 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 SH3GL3Q99963 347 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 GNL3LQ9NVN8 582 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 FSD2A1L4K1 749 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 G3V3G9 751 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 SSBP05455 408 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEB-219ENST00000604864 DESP17661 470 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 DCAF8Q5TAQ9 597 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 MYRIPQ8NFW9 859 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 FOXD4L1Q9NU39 408 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 H0Y626 953 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 HIP1RO75146 1068 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 TRIM16O95361 564 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 RIOK1Q9BRS2 568 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 NOB1Q9ULX3 412 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 NLRP5P59047 1200 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 MICALL1Q8N3F8 863 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 L3MBTL2Q969R5 705 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 MAK16Q9BXY0 300 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 SENP3Q9H4L4 574 aaPredicted RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 SOGA1O94964 1423 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 ANKRD24Q8TF21 1146 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 GOLGA1Q92805 767 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 LUC7L2Q9Y383 392 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 ANAPC15P60006 121 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 KRR1Q13601 381 aaKnown RBP3.88□□□□□ -1.79
NEB-219ENST00000604864 USP48Q86UV5 1035 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 SMARCC2Q8TAQ2 1214 aa3.88□□□□□ -1.79
NEB-219ENST00000604864 ANKRD27Q96NW4 1050 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms