RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, human

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-222	ENST00000604754	SMIM5	Q71RC9	77 aa		13.85	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	FAM89A	Q96GI7	184 aa		13.85	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	SOS2	Q07890	1332 aa	Predicted RBP	13.85	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	GCKR	Q14397	625 aa		13.85	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	TLR7	Q9NYK1	1049 aa	Known RBP	13.85	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	HOXB7	P09629	217 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	SYNE4	Q8N205	404 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	PIGB	Q92521	554 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	CARD10	Q9BWT7	1032 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	KDM6A	O15550	1401 aa	Predicted RBP	13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	NBPF26	B4DH59	902 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	GORAB	Q5T7V8	394 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	NBPF14	Q5TI25	921 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	NBPF10	Q6P3W6	841 aa	Known RBP	13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	NBPF15	Q8N660	670 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	SSH3	Q8TE77	659 aa		13.84	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.83	□□□□□ -0.19
ZSWIM8-222	ENST00000604754	FAM98C	Q17RN3	349 aa	Known RBP	13.83	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	BICDL1	Q6ZP65	573 aa		13.83	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	GPATCH3	Q96I76	525 aa		13.83	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	FSD1	Q9BTV5	496 aa		13.83	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	METTL22	Q9BUU2	404 aa	Predicted RBP	13.83	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	MED1	Q15648	1581 aa	Predicted RBP	13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CPA1	P15085	419 aa		13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	HSP90AB4P	Q58FF6	505 aa		13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	DDB1	Q16531	1140 aa		13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CNTROB	Q8N137	903 aa		13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.82	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ZNF142	P52746	1687 aa	Predicted RBP	13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ALDH1L1	O75891	902 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	MCC	P23508	829 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	TIMM10	P62072	90 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	USP26	Q9BXU7	913 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	RTN4	Q9NQC3	1192 aa	Known RBP	13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	NPHP1	O15259	732 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	TFCP2	Q12800	502 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	KIF6	Q6ZMV9	814 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	EAF2	Q96CJ1	260 aa	Predicted RBP	13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	SNRK	Q9NRH2	765 aa		13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.81	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	8e-8	■□□□□ 9.8
ZSWIM8-222	ENST00000604754	PALD1	Q9ULE6	856 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	IL25	Q9H293	177 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	HDAC5	Q9UQL6	1122 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ST18	O60284	1047 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	RAB11FIP3	O75154	756 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	STARD3NL	O95772	234 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CHGB	P05060	677 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CHML	P26374	656 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	TCEANC2	Q96MN5	208 aa		13.8	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	MEX3C	Q5U5Q3	659 aa	Known RBP	13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ESYT1	Q9BSJ8	1104 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CWC25	Q9NXE8	425 aa	Predicted RBP	13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	RGPD5	Q99666	1765 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754		K7ELQ4	463 aa	Predicted RBP	13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	DDX46	Q7L014	1031 aa	Known RBP	13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	KAZALD1	Q96I82	304 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CHAMP1	Q96JM3	812 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	RGPD1	P0DJD0	1748 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ECHDC1	Q9NTX5	307 aa		13.79	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	SLFNL1	Q499Z3	407 aa		13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CCDC24	Q8N4L8	307 aa		13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CHMP5	Q9NZZ3	219 aa		13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	CAMTA1	Q9Y6Y1	1673 aa		13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	SASH1	O94885	1247 aa		13.78	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	KCNQ2	O43526	872 aa		13.77	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ATP6V1A	P38606	617 aa		13.77	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	ZGPAT	Q8N5A5	531 aa	Known RBP	13.77	□□□□□ -0.2
ZSWIM8-222	ENST00000604754	TOM1	O60784	492 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	GTF2E1	P29083	439 aa	Predicted RBP	13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	RBM25	P49756	843 aa	Known RBP	13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	CCDC57	Q2TAC2	916 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	HELB	Q8NG08	1087 aa	Predicted RBP	13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	PLBD2	Q8NHP8	589 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	FAM227B	Q96M60	508 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	ZBTB1	Q9Y2K1	713 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	ERVV-2	B6SEH9	535 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	PPFIA3	O75145	1194 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	PRPF40B	Q6NWY9	871 aa	Known RBP	13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	KIF2C	Q99661	725 aa		13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	TRMT112	Q9UI30	125 aa	Known RBP	13.77	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	STRCP1	A6NGW2	1772 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	GLRX3	O76003	335 aa	Known RBP	13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	HSP90AB3P	Q58FF7	597 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	DBNDD2	Q9BQY9	259 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	PUS3	Q9BZE2	481 aa	Known RBP	13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	ATG3	Q9NT62	314 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	HLF	Q16534	295 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	LRRC24	Q50LG9	513 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	HEG1	Q9ULI3	1381 aa		13.76	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	SSFA2	P28290	1259 aa		13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	FGD1	P98174	961 aa		13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	POLA2	Q14181	598 aa		13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	RABEP1	Q15276	862 aa		13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	ERC1	Q8IUD2	1116 aa		13.75	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	HCLS1	P14317	486 aa	Predicted RBP	13.74	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	DCC	P43146	1447 aa		13.74	□□□□□ -0.21
ZSWIM8-222	ENST00000604754	GSE1	Q14687	1217 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms