RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
SPCS1-205ENST00000602728 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
SPCS1-205ENST00000602728 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
SPCS1-205ENST00000602728 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
SPCS1-205ENST00000602728 RFC4P35249 363 aa13.28□□□□□ -0.28
SPCS1-205ENST00000602728 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
SPCS1-205ENST00000602728 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
SPCS1-205ENST00000602728 KCNQ3O43525 872 aa13.27□□□□□ -0.29
SPCS1-205ENST00000602728 CYP19A1P11511 503 aaPredicted RBP13.27□□□□□ -0.29
SPCS1-205ENST00000602728 DDR1Q08345 913 aa13.27□□□□□ -0.29
SPCS1-205ENST00000602728 TEFQ10587 303 aa13.27□□□□□ -0.29
SPCS1-205ENST00000602728 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.29
SPCS1-205ENST00000602728 HEG1Q9ULI3 1381 aa13.27□□□□□ -0.29
SPCS1-205ENST00000602728 DCTN1Q14203 1278 aa13.26□□□□□ -0.29
SPCS1-205ENST00000602728 MCM10Q7L590 875 aa13.26□□□□□ -0.29
SPCS1-205ENST00000602728 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
SPCS1-205ENST00000602728 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
SPCS1-205ENST00000602728 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
SPCS1-205ENST00000602728 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
SPCS1-205ENST00000602728 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
SPCS1-205ENST00000602728 CARMIL3Q8ND23 1372 aa13.24□□□□□ -0.29
SPCS1-205ENST00000602728 PSEN1P49768 467 aa13.24□□□□□ -0.29
SPCS1-205ENST00000602728 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
SPCS1-205ENST00000602728 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
SPCS1-205ENST00000602728 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 SBF1O95248 1867 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 PRAMEF22A3QJZ6 481 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
SPCS1-205ENST00000602728 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
SPCS1-205ENST00000602728 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
SPCS1-205ENST00000602728 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
SPCS1-205ENST00000602728 ADCY9O60503 1353 aa13.22□□□□□ -0.29
SPCS1-205ENST00000602728 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
SPCS1-205ENST00000602728 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
SPCS1-205ENST00000602728 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
SPCS1-205ENST00000602728 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
SPCS1-205ENST00000602728 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
SPCS1-205ENST00000602728 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
SPCS1-205ENST00000602728 NUP98P52948 1817 aa13.21□□□□□ -0.29
SPCS1-205ENST00000602728 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
SPCS1-205ENST00000602728 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
SPCS1-205ENST00000602728 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
SPCS1-205ENST00000602728 FCHSD2O94868 740 aa13.21□□□□□ -0.29
SPCS1-205ENST00000602728 DPEP1P16444 411 aa13.21□□□□□ -0.29
SPCS1-205ENST00000602728 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
SPCS1-205ENST00000602728 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
SPCS1-205ENST00000602728 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
SPCS1-205ENST00000602728 ZPR1O75312 459 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 A1BGP04217 495 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 NFIXQ14938 502 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
SPCS1-205ENST00000602728 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
SPCS1-205ENST00000602728 TM4SF1P30408 202 aa13.18□□□□□ -0.3
SPCS1-205ENST00000602728 CHRNA5P30532 468 aa13.18□□□□□ -0.3
SPCS1-205ENST00000602728 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
SPCS1-205ENST00000602728 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
SPCS1-205ENST00000602728 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
SPCS1-205ENST00000602728 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
SPCS1-205ENST00000602728 STARD3NLO95772 234 aa13.17□□□□□ -0.3
SPCS1-205ENST00000602728 KCNA3P22001 575 aa13.17□□□□□ -0.3
SPCS1-205ENST00000602728 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
SPCS1-205ENST00000602728 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
SPCS1-205ENST00000602728 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
SPCS1-205ENST00000602728 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
SPCS1-205ENST00000602728 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 TGFB2P61812 414 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-205ENST00000602728 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
SPCS1-205ENST00000602728 RALBP1Q15311 655 aa13.15□□□□□ -0.3
SPCS1-205ENST00000602728 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
SPCS1-205ENST00000602728 SLX4Q8IY92 1834 aa13.15□□□□□ -0.3
SPCS1-205ENST00000602728 DICER1Q9UPY3 1922 aaKnown RBP13.14□□□□□ -0.31
SPCS1-205ENST00000602728 ST18O60284 1047 aa13.14□□□□□ -0.31
SPCS1-205ENST00000602728 CAMTA2O94983 1202 aa13.14□□□□□ -0.31
SPCS1-205ENST00000602728 SERPINB2P05120 415 aa13.14□□□□□ -0.31
SPCS1-205ENST00000602728 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
SPCS1-205ENST00000602728 LAMB2P55268 1798 aa13.14□□□□□ -0.31
SPCS1-205ENST00000602728 NBPF26B4DH59 902 aa13.13□□□□□ -0.31
SPCS1-205ENST00000602728 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
SPCS1-205ENST00000602728 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
SPCS1-205ENST00000602728 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
SPCS1-205ENST00000602728 NBPF15Q8N660 670 aa13.13□□□□□ -0.31
SPCS1-205ENST00000602728 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
SPCS1-205ENST00000602728 A0A087WZG4 1122 aa13.12□□□□□ -0.31
SPCS1-205ENST00000602728 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-205ENST00000602728 NEFMP07197 916 aa13.12□□□□□ -0.31
SPCS1-205ENST00000602728 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms