RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.54
PPFIA3-206ENST00000602655 USP16Q9Y5T5 823 aa18.46■□□□□ 0.54
PPFIA3-206ENST00000602655 CYP27B1O15528 508 aa18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 DDIT3P35638 169 aa18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 TIGD1Q96MW7 591 aa18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
PPFIA3-206ENST00000602655 RBM25P49756 843 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 SIL1Q9H173 461 aa18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 TSPY26PQ9H489 355 aa18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 TMEM63CQ9P1W3 806 aa18.44■□□□□ 0.54
PPFIA3-206ENST00000602655 AMOTQ4VCS5 1084 aa18.43■□□□□ 0.54
PPFIA3-206ENST00000602655 PEAK1Q9H792 1746 aa18.43■□□□□ 0.54
PPFIA3-206ENST00000602655 RIOK3O14730 519 aaKnown RBP18.43■□□□□ 0.54
PPFIA3-206ENST00000602655 CHD1LQ86WJ1 897 aa18.43■□□□□ 0.54
PPFIA3-206ENST00000602655 MST1RQ04912 1400 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 IFNL2Q8IZJ0 200 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 KCNQ4P56696 695 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 NALCNQ8IZF0 1738 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 NBPF7P0C2Y1 421 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 GPT2Q8TD30 523 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
PPFIA3-206ENST00000602655 SPC24Q8NBT2 197 aa18.41■□□□□ 0.54
PPFIA3-206ENST00000602655 ZCRB1Q8TBF4 217 aaKnown RBP18.41■□□□□ 0.54
PPFIA3-206ENST00000602655 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 PNMA6EA0A0J9YXQ4 647 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 SRCAPQ6ZRS2 3230 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 CRB1P82279 1406 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 PIK3C2AO00443 1686 aa18.4■□□□□ 0.54
PPFIA3-206ENST00000602655 PHKG2P15735 406 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 COPS6Q7L5N1 327 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 OGFRQ9NZT2 677 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 C8orf37Q96NL8 207 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 A1BGP04217 495 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 IBTKQ9P2D0 1353 aaPredicted RBP18.39■□□□□ 0.53
PPFIA3-206ENST00000602655 ZNF592Q92610 1267 aa18.38■□□□□ 0.53
PPFIA3-206ENST00000602655 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-206ENST00000602655 KDRP35968 1356 aa18.38■□□□□ 0.53
PPFIA3-206ENST00000602655 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 XAGE3Q8WTP9 111 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 ADCY5O95622 1261 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 GNAI2P04899 355 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 MYD88Q99836 296 aa18.37■□□□□ 0.53
PPFIA3-206ENST00000602655 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 PXDNQ92626 1479 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 FEZ1Q99689 392 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 CHMP4CQ96CF2 233 aa18.36■□□□□ 0.53
PPFIA3-206ENST00000602655 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 NPHP1O15259 732 aa18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 IL2RBP14784 551 aa18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 SECISBP2LQ93073 1101 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-206ENST00000602655 NGLY1Q96IV0 654 aa18.34■□□□□ 0.53
PPFIA3-206ENST00000602655 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
PPFIA3-206ENST00000602655 ABCC4O15439 1325 aa18.34■□□□□ 0.53
PPFIA3-206ENST00000602655 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
PPFIA3-206ENST00000602655 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.53
PPFIA3-206ENST00000602655 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 CALCOCO1Q9P1Z2 691 aa18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
PPFIA3-206ENST00000602655 MBD3O95983 291 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 APPP05067 770 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 DRC7Q8IY82 874 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 TMX1Q9H3N1 280 aa18.32■□□□□ 0.52
PPFIA3-206ENST00000602655 GPTP24298 496 aa18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 KIF2CQ99661 725 aa18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms