RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 IL17REQ8NFR9 667 aa21.77■■□□□ 1.08
SSBP4-211ENST00000601614 C7orf43Q8WVR3 580 aa21.77■■□□□ 1.08
SSBP4-211ENST00000601614 ZNF541Q9H0D2 1346 aa21.77■■□□□ 1.07
SSBP4-211ENST00000601614 IQCA1LA6NCM1 817 aa21.76■■□□□ 1.07
SSBP4-211ENST00000601614 LBX1P52954 281 aa21.76■■□□□ 1.07
SSBP4-211ENST00000601614 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
SSBP4-211ENST00000601614 SETDB2Q96T68 719 aa21.76■■□□□ 1.07
SSBP4-211ENST00000601614 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
SSBP4-211ENST00000601614 TMEM88BA6NKF7 163 aa21.75■■□□□ 1.07
SSBP4-211ENST00000601614 OLFM4Q6UX06 510 aa21.74■■□□□ 1.07
SSBP4-211ENST00000601614 AIDAQ96BJ3 306 aa21.74■■□□□ 1.07
SSBP4-211ENST00000601614 KCNQ3O43525 872 aa21.73■■□□□ 1.07
SSBP4-211ENST00000601614 ST5P78524 1137 aa21.73■■□□□ 1.07
SSBP4-211ENST00000601614 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-211ENST00000601614 SOGA3Q5TF21 947 aa21.73■■□□□ 1.07
SSBP4-211ENST00000601614 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-211ENST00000601614 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-211ENST00000601614 NPHP1O15259 732 aa21.72■■□□□ 1.07
SSBP4-211ENST00000601614 DIAPH1O60610 1272 aaKnown RBP21.72■■□□□ 1.07
SSBP4-211ENST00000601614 SLC34A2O95436 690 aa21.72■■□□□ 1.07
SSBP4-211ENST00000601614 PIP4K2AP48426 406 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-211ENST00000601614 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-211ENST00000601614 HSPA8P11142 646 aaKnown RBP21.71■■□□□ 1.07
SSBP4-211ENST00000601614 TEFQ10587 303 aa21.71■■□□□ 1.07
SSBP4-211ENST00000601614 CCDC93Q567U6 631 aa21.71■■□□□ 1.07
SSBP4-211ENST00000601614 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
SSBP4-211ENST00000601614 LTBP1Q14766 1721 aa21.7■■□□□ 1.06
SSBP4-211ENST00000601614 RASSF10A6NK89 507 aa21.7■■□□□ 1.06
SSBP4-211ENST00000601614 HACL1Q9UJ83 578 aa21.7■■□□□ 1.06
SSBP4-211ENST00000601614 EPHX2P34913 555 aa21.69■■□□□ 1.06
SSBP4-211ENST00000601614 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
SSBP4-211ENST00000601614 MAP1SQ66K74 1059 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-211ENST00000601614 FMNL2Q96PY5 1086 aa21.69■■□□□ 1.06
SSBP4-211ENST00000601614 RNF123Q5XPI4 1314 aa21.69■■□□□ 1.06
SSBP4-211ENST00000601614 PRAMEF22A3QJZ6 481 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 GNAT3A8MTJ3 354 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 ABHD8Q96I13 439 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 CLEC11AQ9Y240 323 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 USP16Q9Y5T5 823 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 THSD7BQ9C0I4 1608 aa21.68■■□□□ 1.06
SSBP4-211ENST00000601614 COL4A5P29400 1685 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 KLRG2A4D1S0 409 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-211ENST00000601614 NPR1P16066 1061 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 DEFB115Q30KQ5 88 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 NBPF5PQ86XG9 351 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-211ENST00000601614 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
SSBP4-211ENST00000601614 SNED1Q8TER0 1413 aa21.66■■□□□ 1.06
SSBP4-211ENST00000601614 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
SSBP4-211ENST00000601614 FZD9O00144 591 aa21.65■■□□□ 1.06
SSBP4-211ENST00000601614 FMR1Q06787 632 aaKnown RBP eCLIP21.64■■□□□ 1.05
SSBP4-211ENST00000601614 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-211ENST00000601614 CC2D1BQ5T0F9 858 aaKnown RBP21.64■■□□□ 1.05
SSBP4-211ENST00000601614 NPM2Q86SE8 214 aaKnown RBP21.64■■□□□ 1.05
SSBP4-211ENST00000601614 GAS2L2Q8NHY3 880 aa21.64■■□□□ 1.05
SSBP4-211ENST00000601614 TRPM7Q96QT4 1865 aa21.64■■□□□ 1.05
SSBP4-211ENST00000601614 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-211ENST00000601614 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
SSBP4-211ENST00000601614 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
SSBP4-211ENST00000601614 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
SSBP4-211ENST00000601614 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
SSBP4-211ENST00000601614 SYNE4Q8N205 404 aa21.62■■□□□ 1.05
SSBP4-211ENST00000601614 KIF7Q2M1P5 1343 aa21.61■■□□□ 1.05
SSBP4-211ENST00000601614 FAM177BA6PVY3 158 aa21.61■■□□□ 1.05
SSBP4-211ENST00000601614 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
SSBP4-211ENST00000601614 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-211ENST00000601614 RTKN2Q8IZC4 609 aa21.61■■□□□ 1.05
SSBP4-211ENST00000601614 ABT1Q9ULW3 272 aaKnown RBP21.61■■□□□ 1.05
SSBP4-211ENST00000601614 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
SSBP4-211ENST00000601614 MAP2K1Q02750 393 aaPredicted RBP21.6■■□□□ 1.05
SSBP4-211ENST00000601614 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
SSBP4-211ENST00000601614 GPC2Q8N158 579 aa21.6■■□□□ 1.05
SSBP4-211ENST00000601614 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
SSBP4-211ENST00000601614 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
SSBP4-211ENST00000601614 DDX21Q9NR30 783 aaKnown RBP eCLIP21.6■■□□□ 1.05
SSBP4-211ENST00000601614 NIP7Q9Y221 180 aaKnown RBP eCLIP21.6■■□□□ 1.05
SSBP4-211ENST00000601614 SLC51AQ86UW1 340 aa21.59■■□□□ 1.05
SSBP4-211ENST00000601614 NUP98P52948 1817 aa21.58■■□□□ 1.05
SSBP4-211ENST00000601614 TPTE2Q6XPS3 522 aa21.58■■□□□ 1.05
SSBP4-211ENST00000601614 ZNF652Q9Y2D9 606 aa21.58■■□□□ 1.05
SSBP4-211ENST00000601614 HLFQ16534 295 aa21.57■■□□□ 1.04
SSBP4-211ENST00000601614 ABCC12Q96J65 1359 aa21.57■■□□□ 1.04
SSBP4-211ENST00000601614 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
SSBP4-211ENST00000601614 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
SSBP4-211ENST00000601614 LAMB4A4D0S4 1761 aa21.56■■□□□ 1.04
SSBP4-211ENST00000601614 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
SSBP4-211ENST00000601614 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
SSBP4-211ENST00000601614 SCNN1DP51172 638 aa21.55■■□□□ 1.04
SSBP4-211ENST00000601614 CYP4F22Q6NT55 531 aa21.55■■□□□ 1.04
SSBP4-211ENST00000601614 PSMD1Q99460 953 aa21.55■■□□□ 1.04
SSBP4-211ENST00000601614 GJA3Q9Y6H8 435 aa21.55■■□□□ 1.04
SSBP4-211ENST00000601614 CASP8AP2Q9UKL3 1982 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 CCDC85CA6NKD9 419 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 TRAF5O00463 557 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 PRKAR2BP31323 418 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 EPS15P42566 896 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-211ENST00000601614 CST9Q5W186 159 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms