RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CANXP27824 592 aaKnown RBP24.31■■□□□ 1.48
SSBP4-207ENST00000600244 ECE1P42892 770 aa24.31■■□□□ 1.48
SSBP4-207ENST00000600244 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
SSBP4-207ENST00000600244 VSIG10Q8N0Z9 540 aa24.3■■□□□ 1.48
SSBP4-207ENST00000600244 CFAP44Q96MT7 982 aa24.3■■□□□ 1.48
SSBP4-207ENST00000600244 CYP4F22Q6NT55 531 aa24.29■■□□□ 1.48
SSBP4-207ENST00000600244 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
SSBP4-207ENST00000600244 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
SSBP4-207ENST00000600244 TSKSQ9UJT2 592 aa24.29■■□□□ 1.48
SSBP4-207ENST00000600244 A0A087WZG4 1122 aa24.28■■□□□ 1.48
SSBP4-207ENST00000600244 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
SSBP4-207ENST00000600244 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
SSBP4-207ENST00000600244 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
SSBP4-207ENST00000600244 ARFGEF2Q9Y6D5 1785 aa24.26■■□□□ 1.47
SSBP4-207ENST00000600244 FZD9O00144 591 aa24.26■■□□□ 1.47
SSBP4-207ENST00000600244 MAP2K2P36507 400 aa24.26■■□□□ 1.47
SSBP4-207ENST00000600244 FKBP4Q02790 459 aaKnown RBP eCLIP24.26■■□□□ 1.47
SSBP4-207ENST00000600244 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.47
SSBP4-207ENST00000600244 CCDC93Q567U6 631 aa24.26■■□□□ 1.47
SSBP4-207ENST00000600244 ZNF277Q9NRM2 450 aaPredicted RBP24.26■■□□□ 1.47
SSBP4-207ENST00000600244 MRC1P22897 1456 aa24.25■■□□□ 1.47
SSBP4-207ENST00000600244 LTBP1Q14766 1721 aa24.24■■□□□ 1.47
SSBP4-207ENST00000600244 CST9Q5W186 159 aa24.24■■□□□ 1.47
SSBP4-207ENST00000600244 SULT6B1Q6IMI4 303 aa24.24■■□□□ 1.47
SSBP4-207ENST00000600244 CNBD1Q8NA66 436 aa24.24■■□□□ 1.47
SSBP4-207ENST00000600244 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
SSBP4-207ENST00000600244 PAXIP1Q6ZW49 1069 aaPredicted RBP24.23■■□□□ 1.47
SSBP4-207ENST00000600244 GPC2Q8N158 579 aa24.23■■□□□ 1.47
SSBP4-207ENST00000600244 RNMTO43148 476 aaKnown RBP24.22■■□□□ 1.47
SSBP4-207ENST00000600244 CA12O43570 354 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 AOC2O75106 756 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 STARD3NLO95772 234 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 GRM1Q13255 1194 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 TBC1D2BQ9UPU7 963 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 TLL2Q9Y6L7 1015 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 CASP8AP2Q9UKL3 1982 aa24.22■■□□□ 1.47
SSBP4-207ENST00000600244 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
SSBP4-207ENST00000600244 ST5P78524 1137 aa24.2■■□□□ 1.46
SSBP4-207ENST00000600244 DGKZQ13574 1117 aa24.2■■□□□ 1.46
SSBP4-207ENST00000600244 SCN7AQ01118 1682 aa24.2■■□□□ 1.46
SSBP4-207ENST00000600244 OLFM4Q6UX06 510 aa24.18■■□□□ 1.46
SSBP4-207ENST00000600244 KLRG2A4D1S0 409 aaPredicted RBP24.17■■□□□ 1.46
SSBP4-207ENST00000600244 NPR1P16066 1061 aa24.17■■□□□ 1.46
SSBP4-207ENST00000600244 IARSP41252 1262 aaKnown RBP24.17■■□□□ 1.46
SSBP4-207ENST00000600244 RTKN2Q8IZC4 609 aa24.17■■□□□ 1.46
SSBP4-207ENST00000600244 TRAF5O00463 557 aa24.16■■□□□ 1.46
SSBP4-207ENST00000600244 CAMTA2O94983 1202 aa24.16■■□□□ 1.46
SSBP4-207ENST00000600244 IL6STP40189 918 aaPredicted RBP24.16■■□□□ 1.46
SSBP4-207ENST00000600244 UBR2Q8IWV8 1755 aa24.16■■□□□ 1.46
SSBP4-207ENST00000600244 NPHP1O15259 732 aa24.15■■□□□ 1.46
SSBP4-207ENST00000600244 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
SSBP4-207ENST00000600244 TRPM7Q96QT4 1865 aa24.15■■□□□ 1.46
SSBP4-207ENST00000600244 IL13P35225 146 aa24.14■■□□□ 1.45
SSBP4-207ENST00000600244 BRPF1P55201 1214 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-207ENST00000600244 PRPF38BQ5VTL8 546 aaKnown RBP24.14■■□□□ 1.45
SSBP4-207ENST00000600244 SAPCD2Q86UD0 394 aa24.13■■□□□ 1.45
SSBP4-207ENST00000600244 EPS15P42566 896 aa24.12■■□□□ 1.45
SSBP4-207ENST00000600244 SCNN1DP51172 638 aa24.12■■□□□ 1.45
SSBP4-207ENST00000600244 HHIPL1Q96JK4 782 aa24.12■■□□□ 1.45
SSBP4-207ENST00000600244 USP50Q70EL3 339 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-207ENST00000600244 ZNF496Q96IT1 587 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-207ENST00000600244 TEX13AQ9BXU3 409 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-207ENST00000600244 ZNF330Q9Y3S2 320 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-207ENST00000600244 SNED1Q8TER0 1413 aa24.1■■□□□ 1.45
SSBP4-207ENST00000600244 LMOD1P29536 600 aaPredicted RBP24.1■■□□□ 1.45
SSBP4-207ENST00000600244 JDP2Q8WYK2 163 aa24.1■■□□□ 1.45
SSBP4-207ENST00000600244 GJA3Q9Y6H8 435 aa24.1■■□□□ 1.45
SSBP4-207ENST00000600244 HEG1Q9ULI3 1381 aa24.09■■□□□ 1.45
SSBP4-207ENST00000600244 PSMD1Q99460 953 aa24.09■■□□□ 1.45
SSBP4-207ENST00000600244 A1BGP04217 495 aa24.08■■□□□ 1.45
SSBP4-207ENST00000600244 EIF6P56537 245 aaKnown RBP24.08■■□□□ 1.45
SSBP4-207ENST00000600244 SOX10P56693 466 aa24.08■■□□□ 1.45
SSBP4-207ENST00000600244 NBPF5PQ86XG9 351 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-207ENST00000600244 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
SSBP4-207ENST00000600244 COL4A5P29400 1685 aa24.08■■□□□ 1.44
SSBP4-207ENST00000600244 CIAPIN1Q6FI81 312 aa24.07■■□□□ 1.44
SSBP4-207ENST00000600244 MTHFSDQ2M296 383 aaKnown RBP24.06■■□□□ 1.44
SSBP4-207ENST00000600244 ALDH1B1P30837 517 aa24.05■■□□□ 1.44
SSBP4-207ENST00000600244 CLEC4GQ6UXB4 293 aa24.05■■□□□ 1.44
SSBP4-207ENST00000600244 DZIP3Q86Y13 1208 aaKnown RBP24.05■■□□□ 1.44
SSBP4-207ENST00000600244 CELF2O95319 508 aaKnown RBP24.04■■□□□ 1.44
SSBP4-207ENST00000600244 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
SSBP4-207ENST00000600244 BCORQ6W2J9 1755 aa24.03■■□□□ 1.44
SSBP4-207ENST00000600244 ZIC5Q96T25 663 aa24.03■■□□□ 1.44
SSBP4-207ENST00000600244 TPTE2Q6XPS3 522 aa24.02■■□□□ 1.44
SSBP4-207ENST00000600244 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
SSBP4-207ENST00000600244 NOGQ13253 232 aa24■■□□□ 1.43
SSBP4-207ENST00000600244 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
SSBP4-207ENST00000600244 MORC1Q86VD1 984 aa24■■□□□ 1.43
SSBP4-207ENST00000600244 ADARB2Q9NS39 739 aaKnown RBP24■■□□□ 1.43
SSBP4-207ENST00000600244 PGAP2Q9UHJ9 254 aa24■■□□□ 1.43
SSBP4-207ENST00000600244 HMOX1P09601 288 aa23.99■■□□□ 1.43
SSBP4-207ENST00000600244 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-207ENST00000600244 GPRC5DQ9NZD1 345 aa23.98■■□□□ 1.43
SSBP4-207ENST00000600244 LARGE2Q8N3Y3 721 aa23.97■■□□□ 1.43
SSBP4-207ENST00000600244 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
SSBP4-207ENST00000600244 FMNL2Q96PY5 1086 aa23.97■■□□□ 1.43
SSBP4-207ENST00000600244 PANK3Q9H999 370 aa23.97■■□□□ 1.43
SSBP4-207ENST00000600244 ZNF652Q9Y2D9 606 aa23.96■■□□□ 1.43
SSBP4-207ENST00000600244 RGL2O15211 777 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms