RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 USP6P35125 1406 aa15.28■□□□□ 0.04
PPFIA4-210ENST00000599966 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
PPFIA4-210ENST00000599966 TNNT1P13805 278 aa15.28■□□□□ 0.04
PPFIA4-210ENST00000599966 CKAP2LQ8IYA6 745 aa15.28■□□□□ 0.04
PPFIA4-210ENST00000599966 PA2G4Q9UQ80 394 aaKnown RBP15.28■□□□□ 0.04
PPFIA4-210ENST00000599966 SETD1BQ9UPS6 1966 aaKnown RBP15.27■□□□□ 0.04
PPFIA4-210ENST00000599966 GNAI3P08754 354 aa15.27■□□□□ 0.04
PPFIA4-210ENST00000599966 ATP8B2P98198 1209 aa15.27■□□□□ 0.04
PPFIA4-210ENST00000599966 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
PPFIA4-210ENST00000599966 DLC1Q96QB1 1528 aa15.27■□□□□ 0.03
PPFIA4-210ENST00000599966 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.03
PPFIA4-210ENST00000599966 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.03
PPFIA4-210ENST00000599966 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
PPFIA4-210ENST00000599966 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 MCCP23508 829 aa15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 DNM1Q05193 864 aaKnown RBP15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
PPFIA4-210ENST00000599966 SIL1Q9H173 461 aa15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 FLT4P35916 1363 aa15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 CTIFO43310 598 aaKnown RBP15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 NBPF6Q5VWK0 638 aa15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 NBPF4Q96M43 638 aa15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 ANKRD26Q9UPS8 1709 aa15.25■□□□□ 0.03
PPFIA4-210ENST00000599966 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 TEFQ10587 303 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 TPD52L1Q16890 204 aaPredicted RBP15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 PTPRUQ92729 1446 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 FEZ1Q99689 392 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 PSME1Q06323 249 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 CUL4AQ13619 759 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
PPFIA4-210ENST00000599966 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 VPS37CA5D8V6 355 aaPredicted RBP15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 IPO4Q8TEX9 1081 aaKnown RBP15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 TRIM5Q9C035 493 aa15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 DDX41Q9UJV9 622 aaKnown RBP15.23■□□□□ 0.03
PPFIA4-210ENST00000599966 TERF2Q15554 542 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 RHPN1Q8TCX5 695 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 CEP170BQ9Y4F5 1589 aaPredicted RBP15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 SYT1P21579 422 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 KIF18AQ8NI77 898 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 C9orf78Q9NZ63 289 aaPredicted RBP15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 OVOS2A0A0J9YW53 1432 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 OVOS2Q6IE36 1432 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
PPFIA4-210ENST00000599966 USP27XA6NNY8 438 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 KMT5BQ4FZB7 885 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 IGSF1Q8N6C5 1336 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 BTBD11A6QL63 1104 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 UBE2HP62256 183 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 ZNF215Q9UL58 517 aaPredicted RBP15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 SBNO1A3KN83 1393 aa15.21■□□□□ 0.03
PPFIA4-210ENST00000599966 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 STX6O43752 255 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 LARGE1O95461 756 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 MYL6BP14649 208 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 ELF2Q15723 593 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 CCDC83Q8IWF9 413 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
PPFIA4-210ENST00000599966 A0A087WWV3 80 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 CAPN2P17655 700 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 PPFIA3O75145 1194 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 TAF3Q5VWG9 929 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 NECAB1Q8N987 351 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 KIF24Q5T7B8 1368 aa15.19■□□□□ 0.02
PPFIA4-210ENST00000599966 ZC3H6P61129 1189 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 DNAAF4Q8WXU2 420 aa15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 FUCA2Q9BTY2 467 aa15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 SMC3Q9UQE7 1217 aa15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 LIG1P18858 919 aa15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
PPFIA4-210ENST00000599966 GABPB1Q06547 395 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms