RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ERVV-1B6SEH8 477 aa24.27■■□□□ 1.48
COPE-209ENST00000599964 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
COPE-209ENST00000599964 MAP3K15Q6ZN16 1313 aa24.27■■□□□ 1.48
COPE-209ENST00000599964 BRPF1P55201 1214 aaPredicted RBP24.26■■□□□ 1.47
COPE-209ENST00000599964 FKBP5Q13451 457 aaPredicted RBP24.26■■□□□ 1.47
COPE-209ENST00000599964 ANKRD13DQ6ZTN6 518 aa24.26■■□□□ 1.47
COPE-209ENST00000599964 PLBD2Q8NHP8 589 aa24.26■■□□□ 1.47
COPE-209ENST00000599964 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
COPE-209ENST00000599964 RIC3Q7Z5B4 369 aa24.25■■□□□ 1.47
COPE-209ENST00000599964 ZBTB3Q9H5J0 574 aa24.25■■□□□ 1.47
COPE-209ENST00000599964 PTPRCP08575 1304 aa24.25■■□□□ 1.47
COPE-209ENST00000599964 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
COPE-209ENST00000599964 IPO8O15397 1037 aaKnown RBP24.24■■□□□ 1.47
COPE-209ENST00000599964 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
COPE-209ENST00000599964 CLEC4GQ6UXB4 293 aa24.24■■□□□ 1.47
COPE-209ENST00000599964 G2E3Q7L622 706 aa24.24■■□□□ 1.47
COPE-209ENST00000599964 NLGN1Q8N2Q7 840 aa24.24■■□□□ 1.47
COPE-209ENST00000599964 SRP68Q9UHB9 627 aaKnown RBP24.24■■□□□ 1.47
COPE-209ENST00000599964 HSP90AB3PQ58FF7 597 aa24.23■■□□□ 1.47
COPE-209ENST00000599964 BCORQ6W2J9 1755 aa24.23■■□□□ 1.47
COPE-209ENST00000599964 GYS1P13807 737 aa24.22■■□□□ 1.47
COPE-209ENST00000599964 KSR2Q6VAB6 950 aa24.22■■□□□ 1.47
COPE-209ENST00000599964 CASZ1Q86V15 1759 aa24.21■■□□□ 1.47
COPE-209ENST00000599964 BCAR3O75815 825 aa24.21■■□□□ 1.47
COPE-209ENST00000599964 GIGYF2Q6Y7W6 1299 aaKnown RBP24.21■■□□□ 1.47
COPE-209ENST00000599964 PI4KAP2A4QPH2 592 aa24.2■■□□□ 1.46
COPE-209ENST00000599964 PI4KAP1Q8N8J0 262 aa24.2■■□□□ 1.46
COPE-209ENST00000599964 NOB1Q9ULX3 412 aaKnown RBP24.2■■□□□ 1.46
COPE-209ENST00000599964 ARHGAP45Q92619 1136 aa24.19■■□□□ 1.46
COPE-209ENST00000599964 FRAT1Q92837 279 aaPredicted RBP24.19■■□□□ 1.46
COPE-209ENST00000599964 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
COPE-209ENST00000599964 PDGFDQ9GZP0 370 aaPredicted RBP24.19■■□□□ 1.46
COPE-209ENST00000599964 MTFR1LQ9H019 292 aa24.19■■□□□ 1.46
COPE-209ENST00000599964 MAP3K2Q9Y2U5 619 aa24.19■■□□□ 1.46
COPE-209ENST00000599964 NEXNQ0ZGT2 675 aa24.18■■□□□ 1.46
COPE-209ENST00000599964 HLFQ16534 295 aa24.18■■□□□ 1.46
COPE-209ENST00000599964 BCL2L12Q9HB09 334 aa24.18■■□□□ 1.46
COPE-209ENST00000599964 ARFGEF2Q9Y6D5 1785 aa24.18■■□□□ 1.46
COPE-209ENST00000599964 FKBP8Q14318 412 aa24.17■■□□□ 1.46
COPE-209ENST00000599964 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.17■■□□□ 1.46
COPE-209ENST00000599964 DNAAF4Q8WXU2 420 aa24.17■■□□□ 1.46
COPE-209ENST00000599964 NUP98P52948 1817 aa24.17■■□□□ 1.46
COPE-209ENST00000599964 ADCY9O60503 1353 aa24.16■■□□□ 1.46
COPE-209ENST00000599964 TCIRG1Q13488 830 aa24.16■■□□□ 1.46
COPE-209ENST00000599964 ZKSCAN2Q63HK3 967 aa24.16■■□□□ 1.46
COPE-209ENST00000599964 SETDB2Q96T68 719 aa24.16■■□□□ 1.46
COPE-209ENST00000599964 METTL22Q9BUU2 404 aaPredicted RBP24.16■■□□□ 1.46
COPE-209ENST00000599964 ATP10DQ9P241 1426 aa24.16■■□□□ 1.46
COPE-209ENST00000599964 ZBTB7AO95365 584 aa24.15■■□□□ 1.46
COPE-209ENST00000599964 MSL1Q68DK7 614 aa24.15■■□□□ 1.46
COPE-209ENST00000599964 NIP7Q9Y221 180 aaKnown RBP eCLIP24.15■■□□□ 1.46
COPE-209ENST00000599964 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.45
COPE-209ENST00000599964 TBC1D9BQ66K14 1250 aa24.14■■□□□ 1.45
COPE-209ENST00000599964 MS4A1P11836 297 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 POLD1P28340 1107 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 PARP10Q53GL7 1025 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 ATF7IPQ6VMQ6 1270 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 BICDL1Q6ZP65 573 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 MYD88Q99836 296 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 ANKRD36CQ5JPF3 1778 aa24.13■■□□□ 1.45
COPE-209ENST00000599964 F6X3S4 739 aa24.12■■□□□ 1.45
COPE-209ENST00000599964 NFIXQ14938 502 aa24.12■■□□□ 1.45
COPE-209ENST00000599964 SLC4A10Q6U841 1118 aa24.12■■□□□ 1.45
COPE-209ENST00000599964 PARP3Q9Y6F1 533 aa24.12■■□□□ 1.45
COPE-209ENST00000599964 CARMIL3Q8ND23 1372 aa24.12■■□□□ 1.45
COPE-209ENST00000599964 MMP10P09238 476 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 GPTP24298 496 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 TM4SF1P30408 202 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 LINS1Q8NG48 757 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 SPON1Q9HCB6 807 aa24.11■■□□□ 1.45
COPE-209ENST00000599964 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
COPE-209ENST00000599964 TRIM28Q13263 835 aaKnown RBP24.1■■□□□ 1.45
COPE-209ENST00000599964 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
COPE-209ENST00000599964 PXDNLA1KZ92 1463 aa24.1■■□□□ 1.45
COPE-209ENST00000599964 ATP5J2-PTCD1G3V325 749 aa24.09■■□□□ 1.45
COPE-209ENST00000599964 FTSJ3Q8IY81 847 aaKnown RBP24.09■■□□□ 1.45
COPE-209ENST00000599964 CCDC191Q8NCU4 936 aa24.09■■□□□ 1.45
COPE-209ENST00000599964 ISCA1Q9BUE6 129 aa24.09■■□□□ 1.45
COPE-209ENST00000599964 NYXQ9GZU5 481 aa24.09■■□□□ 1.45
COPE-209ENST00000599964 COL24A1Q17RW2 1714 aa24.08■■□□□ 1.45
COPE-209ENST00000599964 NPHP1O15259 732 aa24.08■■□□□ 1.45
COPE-209ENST00000599964 TRIM27P14373 513 aa24.08■■□□□ 1.45
COPE-209ENST00000599964 CCT4P50991 539 aaKnown RBP24.08■■□□□ 1.45
COPE-209ENST00000599964 SRCIN1Q9C0H9 1055 aa24.08■■□□□ 1.45
COPE-209ENST00000599964 TPTE2Q6XPS3 522 aa24.07■■□□□ 1.44
COPE-209ENST00000599964 NLRP10Q86W26 655 aa24.07■■□□□ 1.44
COPE-209ENST00000599964 NBPF5PQ86XG9 351 aaPredicted RBP24.07■■□□□ 1.44
COPE-209ENST00000599964 CWC25Q9NXE8 425 aaPredicted RBP24.07■■□□□ 1.44
COPE-209ENST00000599964 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
COPE-209ENST00000599964 ALDH1L1O75891 902 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 SERPINB2P05120 415 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 GTF2E1P29083 439 aaPredicted RBP24.06■■□□□ 1.44
COPE-209ENST00000599964 BEND3Q5T5X7 828 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 DZIP1LQ8IYY4 767 aaKnown RBP24.06■■□□□ 1.44
COPE-209ENST00000599964 ABCC4O15439 1325 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
COPE-209ENST00000599964 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
COPE-209ENST00000599964 NEURL1BA8MQ27 555 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms