RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
SYMPK-213ENST00000599460 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-213ENST00000599460 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
SYMPK-213ENST00000599460 TET3O43151 1660 aa17.45■□□□□ 0.38
SYMPK-213ENST00000599460 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-213ENST00000599460 ST5P78524 1137 aa17.44■□□□□ 0.38
SYMPK-213ENST00000599460 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
SYMPK-213ENST00000599460 TMOD2Q9NZR1 351 aa17.44■□□□□ 0.38
SYMPK-213ENST00000599460 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
SYMPK-213ENST00000599460 TTF1Q15361 905 aaPredicted RBP17.44■□□□□ 0.38
SYMPK-213ENST00000599460 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
SYMPK-213ENST00000599460 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
SYMPK-213ENST00000599460 LETM1O95202 739 aaPredicted RBP17.43■□□□□ 0.38
SYMPK-213ENST00000599460 KDM5CP41229 1560 aa17.43■□□□□ 0.38
SYMPK-213ENST00000599460 DDX11Q96FC9 970 aa17.43■□□□□ 0.38
SYMPK-213ENST00000599460 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
SYMPK-213ENST00000599460 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
SYMPK-213ENST00000599460 ZNF213O14771 459 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 KRT85P78386 507 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 UTP14AQ9BVJ6 771 aaKnown RBP17.42■□□□□ 0.38
SYMPK-213ENST00000599460 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
SYMPK-213ENST00000599460 TXLNAP40222 546 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
SYMPK-213ENST00000599460 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 CDK5RAP3Q96JB5 506 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
SYMPK-213ENST00000599460 MKNK2Q9HBH9 465 aa17.42■□□□□ 0.38
SYMPK-213ENST00000599460 PLA2R1Q13018 1463 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 ME1P48163 572 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 IQGAP3Q86VI3 1631 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 ZNF622Q969S3 477 aaKnown RBP eCLIP17.41■□□□□ 0.388e-7■□□□□ 10.5
SYMPK-213ENST00000599460 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
SYMPK-213ENST00000599460 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 G2E3Q7L622 706 aa17.41■□□□□ 0.38
SYMPK-213ENST00000599460 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
SYMPK-213ENST00000599460 CHL1O00533 1208 aa17.4■□□□□ 0.38
SYMPK-213ENST00000599460 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
SYMPK-213ENST00000599460 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
SYMPK-213ENST00000599460 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
SYMPK-213ENST00000599460 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.38
SYMPK-213ENST00000599460 PDE4CQ08493 712 aa17.39■□□□□ 0.38
SYMPK-213ENST00000599460 PDE1AP54750 535 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.37
SYMPK-213ENST00000599460 WASF1Q92558 559 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
SYMPK-213ENST00000599460 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 SDSP20132 328 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
SYMPK-213ENST00000599460 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
SYMPK-213ENST00000599460 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
SYMPK-213ENST00000599460 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 ATP2B3Q16720 1220 aa17.38■□□□□ 0.37
SYMPK-213ENST00000599460 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
SYMPK-213ENST00000599460 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 IPO7O95373 1038 aaKnown RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
SYMPK-213ENST00000599460 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-213ENST00000599460 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
SYMPK-213ENST00000599460 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
SYMPK-213ENST00000599460 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
SYMPK-213ENST00000599460 MRE11P49959 708 aa17.36■□□□□ 0.37
SYMPK-213ENST00000599460 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
SYMPK-213ENST00000599460 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-213ENST00000599460 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
SYMPK-213ENST00000599460 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
SYMPK-213ENST00000599460 SH2B1Q9NRF2 756 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-213ENST00000599460 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-213ENST00000599460 SYNMO15061 1565 aa17.36■□□□□ 0.37
SYMPK-213ENST00000599460 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
SYMPK-213ENST00000599460 DCTPP1Q9H773 170 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 LARP6Q9BRS8 491 aaKnown RBP17.35■□□□□ 0.37
SYMPK-213ENST00000599460 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
SYMPK-213ENST00000599460 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 HOXB7P09629 217 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 LIMCH1Q9UPQ0 1083 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 ATP7BP35670 1465 aa17.35■□□□□ 0.37
SYMPK-213ENST00000599460 TPTE2Q6XPS3 522 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 ZNF592Q92610 1267 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 TFCP2L1Q9NZI6 479 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
SYMPK-213ENST00000599460 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 KRT18P05783 430 aaKnown RBP17.34■□□□□ 0.37
SYMPK-213ENST00000599460 SPTY2D1Q68D10 685 aaPredicted RBP17.34■□□□□ 0.37
SYMPK-213ENST00000599460 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 LDHCP07864 332 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 HAND2P61296 217 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms