RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
LINC00649-210ENST00000599421 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
LINC00649-210ENST00000599421 MIER1Q8N108 512 aa12.76□□□□□ -0.37
LINC00649-210ENST00000599421 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
LINC00649-210ENST00000599421 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
LINC00649-210ENST00000599421 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
LINC00649-210ENST00000599421 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
LINC00649-210ENST00000599421 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
LINC00649-210ENST00000599421 SRGNP10124 158 aa12.75□□□□□ -0.37
LINC00649-210ENST00000599421 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
LINC00649-210ENST00000599421 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
LINC00649-210ENST00000599421 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
LINC00649-210ENST00000599421 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
LINC00649-210ENST00000599421 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
LINC00649-210ENST00000599421 LBX1P52954 281 aa12.74□□□□□ -0.37
LINC00649-210ENST00000599421 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
LINC00649-210ENST00000599421 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
LINC00649-210ENST00000599421 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
LINC00649-210ENST00000599421 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
LINC00649-210ENST00000599421 HEG1Q9ULI3 1381 aa12.73□□□□□ -0.37
LINC00649-210ENST00000599421 NPHP1O15259 732 aa12.73□□□□□ -0.37
LINC00649-210ENST00000599421 ST5P78524 1137 aa12.73□□□□□ -0.37
LINC00649-210ENST00000599421 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-210ENST00000599421 ZNF496Q96IT1 587 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-210ENST00000599421 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-210ENST00000599421 RASSF10A6NK89 507 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
LINC00649-210ENST00000599421 CCDC93Q567U6 631 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
LINC00649-210ENST00000599421 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 HACL1Q9UJ83 578 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
LINC00649-210ENST00000599421 ZNF541Q9H0D2 1346 aa12.71□□□□□ -0.37
LINC00649-210ENST00000599421 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
LINC00649-210ENST00000599421 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
LINC00649-210ENST00000599421 ZNF790Q6PG37 636 aa12.71□□□□□ -0.37
LINC00649-210ENST00000599421 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 EPHX2P34913 555 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
LINC00649-210ENST00000599421 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00649-210ENST00000599421 TEFQ10587 303 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
LINC00649-210ENST00000599421 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
LINC00649-210ENST00000599421 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
LINC00649-210ENST00000599421 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
LINC00649-210ENST00000599421 A1BGP04217 495 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 NPR1P16066 1061 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 FMNL2Q96PY5 1086 aa12.69□□□□□ -0.38
LINC00649-210ENST00000599421 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
LINC00649-210ENST00000599421 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
LINC00649-210ENST00000599421 MAP1SQ66K74 1059 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-210ENST00000599421 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-210ENST00000599421 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
LINC00649-210ENST00000599421 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
LINC00649-210ENST00000599421 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
LINC00649-210ENST00000599421 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
LINC00649-210ENST00000599421 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
LINC00649-210ENST00000599421 FZD9O00144 591 aa12.67□□□□□ -0.38
LINC00649-210ENST00000599421 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
LINC00649-210ENST00000599421 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
LINC00649-210ENST00000599421 RTKN2Q8IZC4 609 aa12.67□□□□□ -0.38
LINC00649-210ENST00000599421 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
LINC00649-210ENST00000599421 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
LINC00649-210ENST00000599421 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 GPC2Q8N158 579 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
LINC00649-210ENST00000599421 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
LINC00649-210ENST00000599421 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
LINC00649-210ENST00000599421 KCNQ3O43525 872 aa12.65□□□□□ -0.38
LINC00649-210ENST00000599421 RGS19P49795 217 aa12.65□□□□□ -0.38
LINC00649-210ENST00000599421 MLLT1Q03111 559 aaPredicted RBP12.65□□□□□ -0.38
LINC00649-210ENST00000599421 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
LINC00649-210ENST00000599421 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
LINC00649-210ENST00000599421 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00649-210ENST00000599421 RALBP1Q15311 655 aa12.64□□□□□ -0.39
LINC00649-210ENST00000599421 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
LINC00649-210ENST00000599421 SYNE4Q8N205 404 aa12.64□□□□□ -0.39
LINC00649-210ENST00000599421 CCDC85CA6NKD9 419 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 RGL2O15211 777 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 ECE1P42892 770 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 PIP4K2AP48426 406 aaPredicted RBP12.63□□□□□ -0.39
LINC00649-210ENST00000599421 CAPNS2Q96L46 248 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 PSMD1Q99460 953 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms