RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 SUZ12Q15022 739 aaKnown RBP11.35□□□□□ -0.59
LINC00343-207ENST00000599179 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 MED14O60244 1454 aa11.34□□□□□ -0.59
LINC00343-207ENST00000599179 LOC100996750A0A140TA64 210 aa11.34□□□□□ -0.59
LINC00343-207ENST00000599179 LYPD4Q6UWN0 246 aa11.34□□□□□ -0.59
LINC00343-207ENST00000599179 KRTAP4-6Q9BYQ5 205 aa11.34□□□□□ -0.59
LINC00343-207ENST00000599179 POLR1AO95602 1720 aaPredicted RBP11.34□□□□□ -0.59
LINC00343-207ENST00000599179 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
LINC00343-207ENST00000599179 ATP7AQ04656 1500 aa11.34□□□□□ -0.59
LINC00343-207ENST00000599179 CELA2BP08218 269 aaPredicted RBP11.33□□□□□ -0.6
LINC00343-207ENST00000599179 CLN3Q13286 438 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 WDR44Q5JSH3 913 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
LINC00343-207ENST00000599179 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
LINC00343-207ENST00000599179 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
LINC00343-207ENST00000599179 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
LINC00343-207ENST00000599179 EEA1Q15075 1411 aa11.31□□□□□ -0.6
LINC00343-207ENST00000599179 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 NSFL1CQ9UNZ2 370 aaKnown RBP11.3□□□□□ -0.6
LINC00343-207ENST00000599179 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 PZPP20742 1482 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
LINC00343-207ENST00000599179 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
LINC00343-207ENST00000599179 DBN1Q16643 649 aa11.29□□□□□ -0.6
LINC00343-207ENST00000599179 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
LINC00343-207ENST00000599179 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
LINC00343-207ENST00000599179 SYNMO15061 1565 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 MIA2Q96PC5 1412 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 TRAK2O60296 914 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 POU4F2Q12837 409 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-207ENST00000599179 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
LINC00343-207ENST00000599179 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
LINC00343-207ENST00000599179 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
LINC00343-207ENST00000599179 NLRP1Q9C000 1473 aa11.27□□□□□ -0.6
LINC00343-207ENST00000599179 GPR25O00155 361 aa11.27□□□□□ -0.61
LINC00343-207ENST00000599179 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
LINC00343-207ENST00000599179 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
LINC00343-207ENST00000599179 IQGAP1P46940 1657 aa11.27□□□□□ -0.61
LINC00343-207ENST00000599179 GNRH1P01148 92 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 BCRP11274 1271 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
LINC00343-207ENST00000599179 SCTRP47872 440 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 GTPBP3Q969Y2 492 aaKnown RBP11.26□□□□□ -0.61
LINC00343-207ENST00000599179 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
LINC00343-207ENST00000599179 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-207ENST00000599179 KIF3BO15066 747 aa11.25□□□□□ -0.61
LINC00343-207ENST00000599179 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
LINC00343-207ENST00000599179 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-207ENST00000599179 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
LINC00343-207ENST00000599179 F11P03951 625 aa11.24□□□□□ -0.61
LINC00343-207ENST00000599179 MX2P20592 715 aa11.24□□□□□ -0.61
LINC00343-207ENST00000599179 NUCKS1Q9H1E3 243 aaKnown RBP11.24□□□□□ -0.61
LINC00343-207ENST00000599179 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
LINC00343-207ENST00000599179 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
LINC00343-207ENST00000599179 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
LINC00343-207ENST00000599179 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
LINC00343-207ENST00000599179 MYCP01106 439 aaPredicted RBP11.23□□□□□ -0.61
LINC00343-207ENST00000599179 BEND7Q8N7W2 519 aaPredicted RBP11.23□□□□□ -0.61
LINC00343-207ENST00000599179 MTMR14Q8NCE2 650 aa11.23□□□□□ -0.61
LINC00343-207ENST00000599179 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
LINC00343-207ENST00000599179 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
LINC00343-207ENST00000599179 ESYT1Q9BSJ8 1104 aa11.22□□□□□ -0.61
LINC00343-207ENST00000599179 ZNF644Q9H582 1327 aaPredicted RBP11.21□□□□□ -0.61
LINC00343-207ENST00000599179 GTF2E1P29083 439 aaPredicted RBP11.21□□□□□ -0.61
LINC00343-207ENST00000599179 CNKSR1Q969H4 720 aa11.21□□□□□ -0.61
LINC00343-207ENST00000599179 TMEM94Q12767 1356 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 GPR37L1O60883 481 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 MAP2K3P46734 347 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 ACDQ96AP0 544 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
LINC00343-207ENST00000599179 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
LINC00343-207ENST00000599179 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 JCADQ9P266 1359 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 A0A1B0GTH6 734 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 LTKP29376 864 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
LINC00343-207ENST00000599179 ZC3H13Q5T200 1668 aaKnown RBP11.18□□□□□ -0.62
LINC00343-207ENST00000599179 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
LINC00343-207ENST00000599179 PRM3Q9NNZ6 103 aa11.18□□□□□ -0.62
LINC00343-207ENST00000599179 MBD5Q9P267 1494 aa11.18□□□□□ -0.62
LINC00343-207ENST00000599179 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms