RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NEFMP07197 916 aa22.66■■□□□ 1.22
PNKP-210ENST00000597965 MASTLQ96GX5 879 aa22.66■■□□□ 1.22
PNKP-210ENST00000597965 TAOK3Q9H2K8 898 aa22.66■■□□□ 1.22
PNKP-210ENST00000597965 PRELPP51888 382 aa22.65■■□□□ 1.22
PNKP-210ENST00000597965 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
PNKP-210ENST00000597965 DICER1Q9UPY3 1922 aaKnown RBP22.65■■□□□ 1.22
PNKP-210ENST00000597965 FER1L6Q2WGJ9 1857 aa22.64■■□□□ 1.22
PNKP-210ENST00000597965 SRGNP10124 158 aa22.64■■□□□ 1.21
PNKP-210ENST00000597965 NBPF5PQ86XG9 351 aaPredicted RBP22.64■■□□□ 1.21
PNKP-210ENST00000597965 USP16Q9Y5T5 823 aa22.64■■□□□ 1.21
PNKP-210ENST00000597965 KCNQ3O43525 872 aa22.63■■□□□ 1.21
PNKP-210ENST00000597965 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
PNKP-210ENST00000597965 HTRA3P83110 453 aa22.62■■□□□ 1.21
PNKP-210ENST00000597965 PRPF40BQ6NWY9 871 aaKnown RBP22.62■■□□□ 1.21
PNKP-210ENST00000597965 TPTE2Q6XPS3 522 aa22.62■■□□□ 1.21
PNKP-210ENST00000597965 ZNF219Q9P2Y4 722 aaPredicted RBP22.62■■□□□ 1.21
PNKP-210ENST00000597965 COL11A2P13942 1736 aaPredicted RBP22.62■■□□□ 1.21
PNKP-210ENST00000597965 MCM10Q7L590 875 aa22.61■■□□□ 1.21
PNKP-210ENST00000597965 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
PNKP-210ENST00000597965 TAF7Q15545 349 aaPredicted RBP22.6■■□□□ 1.21
PNKP-210ENST00000597965 ARFGEF2Q9Y6D5 1785 aa22.6■■□□□ 1.21
PNKP-210ENST00000597965 NPR1P16066 1061 aa22.59■■□□□ 1.21
PNKP-210ENST00000597965 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
PNKP-210ENST00000597965 NIP7Q9Y221 180 aaKnown RBP eCLIP22.58■■□□□ 1.21
PNKP-210ENST00000597965 IQCA1LA6NCM1 817 aa22.57■■□□□ 1.2
PNKP-210ENST00000597965 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
PNKP-210ENST00000597965 SLX4Q8IY92 1834 aa22.57■■□□□ 1.2
PNKP-210ENST00000597965 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
PNKP-210ENST00000597965 CACNA1SQ13698 1873 aa22.56■■□□□ 1.2
PNKP-210ENST00000597965 KLRG2A4D1S0 409 aaPredicted RBP22.55■■□□□ 1.2
PNKP-210ENST00000597965 POTECB2RU33 542 aa22.55■■□□□ 1.2
PNKP-210ENST00000597965 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
PNKP-210ENST00000597965 ALDH1B1P30837 517 aa22.55■■□□□ 1.2
PNKP-210ENST00000597965 PIP4K2AP48426 406 aaPredicted RBP22.55■■□□□ 1.2
PNKP-210ENST00000597965 RTKN2Q8IZC4 609 aa22.55■■□□□ 1.2
PNKP-210ENST00000597965 PRAMEF22A3QJZ6 481 aa22.54■■□□□ 1.2
PNKP-210ENST00000597965 CHADLQ6NUI6 762 aa22.54■■□□□ 1.2
PNKP-210ENST00000597965 DCTN1Q14203 1278 aa22.53■■□□□ 1.2
PNKP-210ENST00000597965 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
PNKP-210ENST00000597965 NBPF26B4DH59 902 aa22.52■■□□□ 1.2
PNKP-210ENST00000597965 FKBP4Q02790 459 aaKnown RBP eCLIP22.52■■□□□ 1.2
PNKP-210ENST00000597965 NBPF10Q6P3W6 841 aaKnown RBP22.52■■□□□ 1.2
PNKP-210ENST00000597965 NBPF15Q8N660 670 aa22.52■■□□□ 1.2
PNKP-210ENST00000597965 C7orf43Q8WVR3 580 aa22.52■■□□□ 1.2
PNKP-210ENST00000597965 PCNTO95613 3336 aa22.52■■□□□ 1.2
PNKP-210ENST00000597965 ERVV-1B6SEH8 477 aa22.51■■□□□ 1.19
PNKP-210ENST00000597965 DDNO94850 711 aaPredicted RBP22.51■■□□□ 1.19
PNKP-210ENST00000597965 LAMB4A4D0S4 1761 aa22.5■■□□□ 1.19
PNKP-210ENST00000597965 SCN4AP35499 1836 aa22.5■■□□□ 1.19
PNKP-210ENST00000597965 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
PNKP-210ENST00000597965 CREBZFQ9NS37 354 aa22.5■■□□□ 1.19
PNKP-210ENST00000597965 KIF6Q6ZMV9 814 aa22.49■■□□□ 1.19
PNKP-210ENST00000597965 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
PNKP-210ENST00000597965 LDHDQ86WU2 507 aa22.48■■□□□ 1.19
PNKP-210ENST00000597965 FAM177BA6PVY3 158 aa22.47■■□□□ 1.19
PNKP-210ENST00000597965 COL13A1Q5TAT6 717 aaPredicted RBP22.47■■□□□ 1.19
PNKP-210ENST00000597965 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
PNKP-210ENST00000597965 MAPK8IP3Q9UPT6 1336 aa22.47■■□□□ 1.19
PNKP-210ENST00000597965 HLFQ16534 295 aa22.46■■□□□ 1.19
PNKP-210ENST00000597965 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
PNKP-210ENST00000597965 HSPA1AP0DMV8 641 aaKnown RBP22.45■■□□□ 1.18
PNKP-210ENST00000597965 HSPA1BP0DMV9 641 aaKnown RBP22.45■■□□□ 1.18
PNKP-210ENST00000597965 NFE2L2Q16236 605 aa22.45■■□□□ 1.18
PNKP-210ENST00000597965 MAP3K15Q6ZN16 1313 aa22.45■■□□□ 1.18
PNKP-210ENST00000597965 KDM3BQ7LBC6 1761 aa22.45■■□□□ 1.18
PNKP-210ENST00000597965 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
PNKP-210ENST00000597965 IARSP41252 1262 aaKnown RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 EIF4A1P60842 406 aaKnown RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 ERBB4Q15303 1308 aa22.44■■□□□ 1.18
PNKP-210ENST00000597965 PNMA8AQ86V59 439 aaPredicted RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 TNS4Q8IZW8 715 aa22.44■■□□□ 1.18
PNKP-210ENST00000597965 JDP2Q8WYK2 163 aa22.44■■□□□ 1.18
PNKP-210ENST00000597965 TAF1DQ9H5J8 278 aaPredicted RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 ZNF277Q9NRM2 450 aaPredicted RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
PNKP-210ENST00000597965 HACL1Q9UJ83 578 aa22.44■■□□□ 1.18
PNKP-210ENST00000597965 CRY2Q49AN0 593 aa22.43■■□□□ 1.18
PNKP-210ENST00000597965 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
PNKP-210ENST00000597965 RPGRQ92834 1020 aaKnown RBP22.43■■□□□ 1.18
PNKP-210ENST00000597965 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
PNKP-210ENST00000597965 PSMD1Q99460 953 aa22.43■■□□□ 1.18
PNKP-210ENST00000597965 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
PNKP-210ENST00000597965 NUP98P52948 1817 aa22.42■■□□□ 1.18
PNKP-210ENST00000597965 RIC1Q4ADV7 1423 aa22.41■■□□□ 1.18
PNKP-210ENST00000597965 GPC2Q8N158 579 aa22.41■■□□□ 1.18
PNKP-210ENST00000597965 SYNE4Q8N205 404 aa22.41■■□□□ 1.18
PNKP-210ENST00000597965 TMX4Q9H1E5 349 aaPredicted RBP22.41■■□□□ 1.18
PNKP-210ENST00000597965 FZD9O00144 591 aa22.4■■□□□ 1.18
PNKP-210ENST00000597965 POTEIP0CG38 1075 aa22.4■■□□□ 1.18
PNKP-210ENST00000597965 POTEJP0CG39 1038 aa22.4■■□□□ 1.18
PNKP-210ENST00000597965 EAPPQ56P03 285 aaPredicted RBP22.4■■□□□ 1.18
PNKP-210ENST00000597965 PASKQ96RG2 1323 aa22.39■■□□□ 1.18
PNKP-210ENST00000597965 MYL6BP14649 208 aa22.39■■□□□ 1.17
PNKP-210ENST00000597965 HOXA10P31260 410 aaPredicted RBP22.39■■□□□ 1.17
PNKP-210ENST00000597965 EPHX2P34913 555 aa22.39■■□□□ 1.17
PNKP-210ENST00000597965 PPP1R42Q7Z4L9 355 aa22.39■■□□□ 1.17
PNKP-210ENST00000597965 NUTM1Q86Y26 1132 aa22.39■■□□□ 1.17
PNKP-210ENST00000597965 RBM17Q96I25 401 aaKnown RBP22.39■■□□□ 1.17
PNKP-210ENST00000597965 CLEC11AQ9Y240 323 aa22.39■■□□□ 1.17
PNKP-210ENST00000597965 EIF6P56537 245 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms