RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
ZNF548-207ENST00000597400 C7orf43Q8WVR3 580 aa14.87□□□□□ -0.03
ZNF548-207ENST00000597400 PDZRN3Q9UPQ7 1066 aa14.87□□□□□ -0.03
ZNF548-207ENST00000597400 A0A087WZG4 1122 aa14.86□□□□□ -0.03
ZNF548-207ENST00000597400 TMEM88BA6NKF7 163 aa14.86□□□□□ -0.03
ZNF548-207ENST00000597400 STARD3NLO95772 234 aa14.86□□□□□ -0.03
ZNF548-207ENST00000597400 HSPA8P11142 646 aaKnown RBP14.86□□□□□ -0.03
ZNF548-207ENST00000597400 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 A1BGP04217 495 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 IL6STP40189 918 aaPredicted RBP14.85□□□□□ -0.03
ZNF548-207ENST00000597400 PIP4K2AP48426 406 aaPredicted RBP14.85□□□□□ -0.03
ZNF548-207ENST00000597400 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
ZNF548-207ENST00000597400 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
ZNF548-207ENST00000597400 RASSF10A6NK89 507 aa14.84□□□□□ -0.03
ZNF548-207ENST00000597400 AIDAQ96BJ3 306 aa14.84□□□□□ -0.03
ZNF548-207ENST00000597400 MASTLQ96GX5 879 aa14.84□□□□□ -0.03
ZNF548-207ENST00000597400 ABHD8Q96I13 439 aa14.84□□□□□ -0.03
ZNF548-207ENST00000597400 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
ZNF548-207ENST00000597400 RNF123Q5XPI4 1314 aa14.84□□□□□ -0.03
ZNF548-207ENST00000597400 NUP98P52948 1817 aa14.83□□□□□ -0.04
ZNF548-207ENST00000597400 KCNQ3O43525 872 aa14.83□□□□□ -0.04
ZNF548-207ENST00000597400 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
ZNF548-207ENST00000597400 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
ZNF548-207ENST00000597400 EPHX2P34913 555 aa14.82□□□□□ -0.04
ZNF548-207ENST00000597400 EIF4G2P78344 907 aaKnown RBP eCLIP14.82□□□□□ -0.04
ZNF548-207ENST00000597400 ST5P78524 1137 aa14.82□□□□□ -0.04
ZNF548-207ENST00000597400 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
ZNF548-207ENST00000597400 KNSTRNQ9Y448 316 aa14.82□□□□□ -0.04
ZNF548-207ENST00000597400 CEMIPQ8WUJ3 1361 aa14.82□□□□□ -0.04
ZNF548-207ENST00000597400 PRAMEF22A3QJZ6 481 aa14.81□□□□□ -0.04
ZNF548-207ENST00000597400 FKBP4Q02790 459 aaKnown RBP eCLIP14.81□□□□□ -0.04
ZNF548-207ENST00000597400 FMR1Q06787 632 aaKnown RBP eCLIP14.81□□□□□ -0.04
ZNF548-207ENST00000597400 SOGA3Q5TF21 947 aa14.81□□□□□ -0.04
ZNF548-207ENST00000597400 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
ZNF548-207ENST00000597400 HACL1Q9UJ83 578 aa14.81□□□□□ -0.04
ZNF548-207ENST00000597400 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
ZNF548-207ENST00000597400 NPHP1O15259 732 aa14.8□□□□□ -0.04
ZNF548-207ENST00000597400 SLC51AQ86UW1 340 aa14.8□□□□□ -0.04
ZNF548-207ENST00000597400 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
ZNF548-207ENST00000597400 WDR33Q9C0J8 1336 aaKnown RBP14.8□□□□□ -0.04
ZNF548-207ENST00000597400 KLRG2A4D1S0 409 aaPredicted RBP14.79□□□□□ -0.04
ZNF548-207ENST00000597400 FZD9O00144 591 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
ZNF548-207ENST00000597400 TEFQ10587 303 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 DEFB115Q30KQ5 88 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 CNTROBQ8N137 903 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 FMNL2Q96PY5 1086 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 TEX13AQ9BXU3 409 aaPredicted RBP14.79□□□□□ -0.04
ZNF548-207ENST00000597400 CASP8AP2Q9UKL3 1982 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
ZNF548-207ENST00000597400 GNAT3A8MTJ3 354 aa14.78□□□□□ -0.04
ZNF548-207ENST00000597400 NPR1P16066 1061 aa14.78□□□□□ -0.04
ZNF548-207ENST00000597400 NBPF5PQ86XG9 351 aaPredicted RBP14.78□□□□□ -0.04
ZNF548-207ENST00000597400 ABCC12Q96J65 1359 aa14.77□□□□□ -0.04
ZNF548-207ENST00000597400 IARSP41252 1262 aaKnown RBP14.77□□□□□ -0.05
ZNF548-207ENST00000597400 DLG5Q8TDM6 1919 aa14.76□□□□□ -0.05
ZNF548-207ENST00000597400 KDM3BQ7LBC6 1761 aa14.76□□□□□ -0.05
ZNF548-207ENST00000597400 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
ZNF548-207ENST00000597400 ABT1Q9ULW3 272 aaKnown RBP14.76□□□□□ -0.05
ZNF548-207ENST00000597400 LAMB2P55268 1798 aa14.75□□□□□ -0.05
ZNF548-207ENST00000597400 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
ZNF548-207ENST00000597400 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
ZNF548-207ENST00000597400 MAP2K1Q02750 393 aaPredicted RBP14.75□□□□□ -0.05
ZNF548-207ENST00000597400 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
ZNF548-207ENST00000597400 PNMA8AQ86V59 439 aaPredicted RBP14.75□□□□□ -0.05
ZNF548-207ENST00000597400 GPC2Q8N158 579 aa14.75□□□□□ -0.05
ZNF548-207ENST00000597400 SYNE4Q8N205 404 aa14.75□□□□□ -0.05
ZNF548-207ENST00000597400 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
ZNF548-207ENST00000597400 KIF7Q2M1P5 1343 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 FAM177BA6PVY3 158 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 BTBD11A6QL63 1104 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 SCNN1DP51172 638 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
ZNF548-207ENST00000597400 CYP4F22Q6NT55 531 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 CLEC4GQ6UXB4 293 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 PHACTR3Q96KR7 559 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 CAPNS2Q96L46 248 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 TSKSQ9UJT2 592 aa14.74□□□□□ -0.05
ZNF548-207ENST00000597400 TRAF5O00463 557 aa14.73□□□□□ -0.05
ZNF548-207ENST00000597400 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
ZNF548-207ENST00000597400 HLFQ16534 295 aa14.73□□□□□ -0.05
ZNF548-207ENST00000597400 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
ZNF548-207ENST00000597400 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
ZNF548-207ENST00000597400 CCDC85CA6NKD9 419 aa14.72□□□□□ -0.05
ZNF548-207ENST00000597400 EPS15P42566 896 aa14.72□□□□□ -0.05
ZNF548-207ENST00000597400 RGS19P49795 217 aa14.72□□□□□ -0.05
ZNF548-207ENST00000597400 CST9Q5W186 159 aa14.72□□□□□ -0.05
ZNF548-207ENST00000597400 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
ZNF548-207ENST00000597400 PSMD1Q99460 953 aa14.72□□□□□ -0.05
ZNF548-207ENST00000597400 AOC2O75106 756 aa14.71□□□□□ -0.05
ZNF548-207ENST00000597400 MLLT1Q03111 559 aaPredicted RBP14.71□□□□□ -0.05
ZNF548-207ENST00000597400 GRM1Q13255 1194 aa14.71□□□□□ -0.05
ZNF548-207ENST00000597400 CRY2Q49AN0 593 aa14.71□□□□□ -0.05
ZNF548-207ENST00000597400 ZNF652Q9Y2D9 606 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms