RNA–Protein interactions for RNA: ENST00000594658.5

CRTC1-203, Transcript of CREB regulated transcription coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene CRTC1, Length 2,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-203ENST00000594658 FOXO3O43524 673 aa23.45■■□□□ 1.34
CRTC1-203ENST00000594658 KRT85P78386 507 aa23.45■■□□□ 1.34
CRTC1-203ENST00000594658 TPD52L1Q16890 204 aaPredicted RBP23.45■■□□□ 1.34
CRTC1-203ENST00000594658 VPS53Q5VIR6 699 aa23.45■■□□□ 1.34
CRTC1-203ENST00000594658 SSH3Q8TE77 659 aa23.45■■□□□ 1.34
CRTC1-203ENST00000594658 TMEM51Q9NW97 253 aa23.45■■□□□ 1.34
CRTC1-203ENST00000594658 CNTROBQ8N137 903 aa23.44■■□□□ 1.34
CRTC1-203ENST00000594658 CACTINQ8WUQ7 758 aaKnown RBP23.44■■□□□ 1.34
CRTC1-203ENST00000594658 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
CRTC1-203ENST00000594658 TNMDQ9H2S6 317 aa23.44■■□□□ 1.34
CRTC1-203ENST00000594658 ADCK5Q3MIX3 580 aa23.44■■□□□ 1.34
CRTC1-203ENST00000594658 ELP1O95163 1332 aa23.44■■□□□ 1.34
CRTC1-203ENST00000594658 RAB11FIP3O75154 756 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 RAPGEF3O95398 923 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 TDRD7Q8NHU6 1098 aaKnown RBP23.43■■□□□ 1.34
CRTC1-203ENST00000594658 JAKMIP1Q96N16 626 aaKnown RBP23.43■■□□□ 1.34
CRTC1-203ENST00000594658 USP44Q9H0E7 712 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 AKAP12Q02952 1782 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 ME3Q16798 604 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 DACT1Q9NYF0 836 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
CRTC1-203ENST00000594658 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CRTC1-203ENST00000594658 TERF2Q15554 542 aa23.42■■□□□ 1.34
CRTC1-203ENST00000594658 FAM173BQ6P4H8 233 aa23.42■■□□□ 1.34
CRTC1-203ENST00000594658 RHPN1Q8TCX5 695 aa23.42■■□□□ 1.34
CRTC1-203ENST00000594658 SURF6O75683 361 aaKnown RBP23.42■■□□□ 1.34
CRTC1-203ENST00000594658 CEP135Q66GS9 1140 aa23.42■■□□□ 1.34
CRTC1-203ENST00000594658 NECAB1Q8N987 351 aa23.42■■□□□ 1.34
CRTC1-203ENST00000594658 UBTFL1P0CB47 393 aaPredicted RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 CCDC144BQ3MJ40 725 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 LARP1BQ659C4 914 aaKnown RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 CDC37L1Q7L3B6 337 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 FERMT3Q86UX7 667 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 CCDC144CPQ8IYA2 1237 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 ZSWIM6Q9HCJ5 1215 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 TTC21AQ8NDW8 1320 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 N4BP2Q86UW6 1770 aaPredicted RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 PTH1RQ03431 593 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 MTHFSDQ2M296 383 aaKnown RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 HSP90AB2PQ58FF8 381 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 RBM43Q6ZSC3 357 aaKnown RBP23.41■■□□□ 1.34
CRTC1-203ENST00000594658 CLIP2Q9UDT6 1046 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 CYP46A1Q9Y6A2 500 aa23.41■■□□□ 1.34
CRTC1-203ENST00000594658 SETD1AO15047 1707 aaKnown RBP23.4■■□□□ 1.34
CRTC1-203ENST00000594658 CCDC30Q5VVM6 783 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 KRT222Q8N1A0 295 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 ZNF592Q92610 1267 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 ITSN1Q15811 1721 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 CRYBG1Q9Y4K1 1723 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 CCDC171Q6TFL3 1326 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 ZNF397Q8NF99 534 aaPredicted RBP23.4■■□□□ 1.34
CRTC1-203ENST00000594658 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
CRTC1-203ENST00000594658 KMT5BQ4FZB7 885 aa23.39■■□□□ 1.33
CRTC1-203ENST00000594658 PRPF40BQ6NWY9 871 aaKnown RBP23.39■■□□□ 1.33
CRTC1-203ENST00000594658 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
CRTC1-203ENST00000594658 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
CRTC1-203ENST00000594658 CLSTN2Q9H4D0 955 aa23.39■■□□□ 1.33
CRTC1-203ENST00000594658 POLA2Q14181 598 aa23.38■■□□□ 1.33
CRTC1-203ENST00000594658 DDX19AQ9NUU7 478 aaKnown RBP23.38■■□□□ 1.33
CRTC1-203ENST00000594658 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
CRTC1-203ENST00000594658 PEAK1Q9H792 1746 aa23.38■■□□□ 1.33
CRTC1-203ENST00000594658 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
CRTC1-203ENST00000594658 KCNB2Q92953 911 aa23.38■■□□□ 1.33
CRTC1-203ENST00000594658 CACNA1FO60840 1977 aa23.38■■□□□ 1.33
CRTC1-203ENST00000594658 ZNF165P49910 485 aa23.37■■□□□ 1.33
CRTC1-203ENST00000594658 DDX54Q8TDD1 881 aaKnown RBP23.37■■□□□ 1.33
CRTC1-203ENST00000594658 FAM53CQ9NYF3 392 aa23.37■■□□□ 1.33
CRTC1-203ENST00000594658 DNAJC25Q9H1X3 360 aa23.37■■□□□ 1.33
CRTC1-203ENST00000594658 ZNF215Q9UL58 517 aaPredicted RBP23.37■■□□□ 1.33
CRTC1-203ENST00000594658 TPCN1Q9ULQ1 816 aa23.37■■□□□ 1.33
CRTC1-203ENST00000594658 ZBTB22O15209 634 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 CDC25BP30305 580 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 KIF1BPQ96EK5 621 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 GOLGA6L4A6NEF3 574 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 USP27XA6NNY8 438 aa23.36■■□□□ 1.33
CRTC1-203ENST00000594658 CHD2O14647 1828 aaKnown RBP23.35■■□□□ 1.33
CRTC1-203ENST00000594658 SPATA32Q96LK8 384 aa23.35■■□□□ 1.33
CRTC1-203ENST00000594658 SCAND2PQ9GZW5 306 aaPredicted RBP23.35■■□□□ 1.33
CRTC1-203ENST00000594658 TFIP11Q9UBB9 837 aaKnown RBP23.35■■□□□ 1.33
CRTC1-203ENST00000594658 PXDNLA1KZ92 1463 aa23.35■■□□□ 1.33
CRTC1-203ENST00000594658 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
CRTC1-203ENST00000594658 LRRC8AQ8IWT6 810 aa23.35■■□□□ 1.33
CRTC1-203ENST00000594658 PDIA4P13667 645 aaKnown RBP23.34■■□□□ 1.33
CRTC1-203ENST00000594658 RUFY2Q8WXA3 655 aa23.34■■□□□ 1.33
CRTC1-203ENST00000594658 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.34■■□□□ 1.33
CRTC1-203ENST00000594658 V9GYY5 206 aaPredicted RBP23.34■■□□□ 1.33
CRTC1-203ENST00000594658 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
CRTC1-203ENST00000594658 SPATA31D1Q6ZQQ2 1576 aa23.34■■□□□ 1.33
CRTC1-203ENST00000594658 CCDC66A2RUB6 948 aa23.34■■□□□ 1.33
CRTC1-203ENST00000594658 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
CRTC1-203ENST00000594658 NYAP1Q6ZVC0 841 aa23.34■■□□□ 1.33
CRTC1-203ENST00000594658 LEO1Q8WVC0 666 aaPredicted RBP23.34■■□□□ 1.33
CRTC1-203ENST00000594658 NR1I2O75469 434 aa23.33■■□□□ 1.33
CRTC1-203ENST00000594658 ARID5BQ14865 1188 aa23.33■■□□□ 1.33
CRTC1-203ENST00000594658 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
CRTC1-203ENST00000594658 PDCP20941 246 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms