RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
SIN3B-204ENST00000594372 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
SIN3B-204ENST00000594372 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
SIN3B-204ENST00000594372 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
SIN3B-204ENST00000594372 NUP98P52948 1817 aa16.52■□□□□ 0.23
SIN3B-204ENST00000594372 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
SIN3B-204ENST00000594372 DPY19L2Q6NUT2 758 aa16.51■□□□□ 0.23
SIN3B-204ENST00000594372 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
SIN3B-204ENST00000594372 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
SIN3B-204ENST00000594372 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
SIN3B-204ENST00000594372 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
SIN3B-204ENST00000594372 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
SIN3B-204ENST00000594372 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
SIN3B-204ENST00000594372 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 SRGNP10124 158 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 ST5P78524 1137 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 MCM10Q7L590 875 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
SIN3B-204ENST00000594372 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
SIN3B-204ENST00000594372 CEMIPQ8WUJ3 1361 aa16.48■□□□□ 0.23
SIN3B-204ENST00000594372 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
SIN3B-204ENST00000594372 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-204ENST00000594372 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
SIN3B-204ENST00000594372 NBPF5PQ86XG9 351 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-204ENST00000594372 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
SIN3B-204ENST00000594372 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
SIN3B-204ENST00000594372 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
SIN3B-204ENST00000594372 LTBP3Q9NS15 1303 aa16.46■□□□□ 0.23
SIN3B-204ENST00000594372 FOXN1O15353 648 aa16.46■□□□□ 0.23
SIN3B-204ENST00000594372 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
SIN3B-204ENST00000594372 TEX13AQ9BXU3 409 aaPredicted RBP16.46■□□□□ 0.23
SIN3B-204ENST00000594372 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
SIN3B-204ENST00000594372 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 C7orf43Q8WVR3 580 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 COL4A5P29400 1685 aa16.45■□□□□ 0.22
SIN3B-204ENST00000594372 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SIN3B-204ENST00000594372 HLFQ16534 295 aa16.44■□□□□ 0.22
SIN3B-204ENST00000594372 TAF1DQ9H5J8 278 aaPredicted RBP16.44■□□□□ 0.22
SIN3B-204ENST00000594372 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
SIN3B-204ENST00000594372 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 PASKQ96RG2 1323 aa16.43■□□□□ 0.22
SIN3B-204ENST00000594372 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
SIN3B-204ENST00000594372 VEGFBP49765 207 aa16.42■□□□□ 0.22
SIN3B-204ENST00000594372 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
SIN3B-204ENST00000594372 TAF1P21675 1872 aa16.42■□□□□ 0.22
SIN3B-204ENST00000594372 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
SIN3B-204ENST00000594372 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
SIN3B-204ENST00000594372 NPR1P16066 1061 aa16.41■□□□□ 0.22
SIN3B-204ENST00000594372 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIN3B-204ENST00000594372 FMR1Q06787 632 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIN3B-204ENST00000594372 MAP1SQ66K74 1059 aaPredicted RBP16.41■□□□□ 0.22
SIN3B-204ENST00000594372 LDHDQ86WU2 507 aa16.41■□□□□ 0.22
SIN3B-204ENST00000594372 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
SIN3B-204ENST00000594372 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
SIN3B-204ENST00000594372 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
SIN3B-204ENST00000594372 LAMB2P55268 1798 aa16.39■□□□□ 0.21
SIN3B-204ENST00000594372 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
SIN3B-204ENST00000594372 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-204ENST00000594372 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
SIN3B-204ENST00000594372 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
SIN3B-204ENST00000594372 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-204ENST00000594372 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SIN3B-204ENST00000594372 IQCA1LA6NCM1 817 aa16.38■□□□□ 0.21
SIN3B-204ENST00000594372 EPHX2P34913 555 aa16.38■□□□□ 0.21
SIN3B-204ENST00000594372 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
SIN3B-204ENST00000594372 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
SIN3B-204ENST00000594372 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
SIN3B-204ENST00000594372 TMEM88BA6NKF7 163 aa16.37■□□□□ 0.21
SIN3B-204ENST00000594372 GPTP24298 496 aa16.37■□□□□ 0.21
SIN3B-204ENST00000594372 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
SIN3B-204ENST00000594372 CFAP53Q96M91 514 aa16.37■□□□□ 0.21
SIN3B-204ENST00000594372 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
SIN3B-204ENST00000594372 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
SIN3B-204ENST00000594372 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
SIN3B-204ENST00000594372 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 LBX1P52954 281 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
SIN3B-204ENST00000594372 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
SIN3B-204ENST00000594372 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
SIN3B-204ENST00000594372 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
SIN3B-204ENST00000594372 GRM1Q13255 1194 aa16.34■□□□□ 0.21
SIN3B-204ENST00000594372 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
SIN3B-204ENST00000594372 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
SIN3B-204ENST00000594372 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
SIN3B-204ENST00000594372 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
SIN3B-204ENST00000594372 FZD9O00144 591 aa16.33■□□□□ 0.2
SIN3B-204ENST00000594372 MYL6BP14649 208 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms