RNA–Protein interactions for RNA: ENST00000592275.5

USP36-222, Transcript of ubiquitin specific peptidase 36, human

TSL 4

Gene USP36, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-222	ENST00000592275	PIP4K2A	P48426	406 aa	Predicted RBP	18.97	■□□□□ 0.63
USP36-222	ENST00000592275	STYK1	Q6J9G0	422 aa		18.97	■□□□□ 0.63
USP36-222	ENST00000592275	CNBD1	Q8NA66	436 aa		18.97	■□□□□ 0.63
USP36-222	ENST00000592275	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.97	■□□□□ 0.63	3e-6	■■□□□ 12.8
USP36-222	ENST00000592275	CFAP53	Q96M91	514 aa		18.97	■□□□□ 0.63
USP36-222	ENST00000592275	ADAMTSL1	Q8N6G6	1762 aa		18.96	■□□□□ 0.63
USP36-222	ENST00000592275	MCM10	Q7L590	875 aa		18.96	■□□□□ 0.63
USP36-222	ENST00000592275	SNED1	Q8TER0	1413 aa		18.95	■□□□□ 0.62
USP36-222	ENST00000592275	NBPF26	B4DH59	902 aa		18.95	■□□□□ 0.62
USP36-222	ENST00000592275	NBPF10	Q6P3W6	841 aa	Known RBP	18.95	■□□□□ 0.62
USP36-222	ENST00000592275	NBPF15	Q8N660	670 aa		18.95	■□□□□ 0.62
USP36-222	ENST00000592275	SETDB2	Q96T68	719 aa		18.95	■□□□□ 0.62
USP36-222	ENST00000592275	PRPF40B	Q6NWY9	871 aa	Known RBP	18.94	■□□□□ 0.62
USP36-222	ENST00000592275	CLEC4G	Q6UXB4	293 aa		18.94	■□□□□ 0.62
USP36-222	ENST00000592275	C7orf43	Q8WVR3	580 aa		18.94	■□□□□ 0.62
USP36-222	ENST00000592275	RGL2	O15211	777 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	SNRPA1	P09661	255 aa	Known RBP	18.93	■□□□□ 0.62
USP36-222	ENST00000592275	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.93	■□□□□ 0.62
USP36-222	ENST00000592275	ST5	P78524	1137 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
USP36-222	ENST00000592275	DCTN1	Q14203	1278 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	CNKSR1	Q969H4	720 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	TAOK3	Q9H2K8	898 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.93	■□□□□ 0.62
USP36-222	ENST00000592275	NUDC	Q9Y266	331 aa		18.93	■□□□□ 0.62
USP36-222	ENST00000592275	KLRG2	A4D1S0	409 aa	Predicted RBP	18.92	■□□□□ 0.62
USP36-222	ENST00000592275	HTATSF1	O43719	755 aa	Known RBP	18.92	■□□□□ 0.62
USP36-222	ENST00000592275	ERFE	Q4G0M1	354 aa		18.92	■□□□□ 0.62
USP36-222	ENST00000592275	MASTL	Q96GX5	879 aa		18.92	■□□□□ 0.62
USP36-222	ENST00000592275	PCNT	O95613	3336 aa		18.91	■□□□□ 0.62
USP36-222	ENST00000592275	SOGA3	Q5TF21	947 aa		18.89	■□□□□ 0.61
USP36-222	ENST00000592275	RTF1	Q92541	710 aa	Known RBP	18.89	■□□□□ 0.61
USP36-222	ENST00000592275	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.88	■□□□□ 0.61
USP36-222	ENST00000592275	DPY19L2	Q6NUT2	758 aa		18.88	■□□□□ 0.61
USP36-222	ENST00000592275	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.88	■□□□□ 0.61
USP36-222	ENST00000592275	ZNF652	Q9Y2D9	606 aa		18.88	■□□□□ 0.61
USP36-222	ENST00000592275	ABCC12	Q96J65	1359 aa		18.88	■□□□□ 0.61
USP36-222	ENST00000592275	COL4A5	P29400	1685 aa		18.88	■□□□□ 0.61
USP36-222	ENST00000592275	ANKRD36C	Q5JPF3	1778 aa		18.88	■□□□□ 0.61
USP36-222	ENST00000592275	DDN	O94850	711 aa	Predicted RBP	18.87	■□□□□ 0.61
USP36-222	ENST00000592275	POTEI	P0CG38	1075 aa		18.87	■□□□□ 0.61
USP36-222	ENST00000592275	POTEJ	P0CG39	1038 aa		18.87	■□□□□ 0.61
USP36-222	ENST00000592275	RIC1	Q4ADV7	1423 aa		18.87	■□□□□ 0.61
USP36-222	ENST00000592275	NPM2	Q86SE8	214 aa	Known RBP	18.87	■□□□□ 0.61
USP36-222	ENST00000592275	LAMB2	P55268	1798 aa		18.86	■□□□□ 0.61
USP36-222	ENST00000592275	NPR1	P16066	1061 aa		18.86	■□□□□ 0.61
USP36-222	ENST00000592275	HLF	Q16534	295 aa		18.86	■□□□□ 0.61
USP36-222	ENST00000592275	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.86	■□□□□ 0.61
USP36-222	ENST00000592275	PLEKHF1	Q96S99	279 aa		18.86	■□□□□ 0.61
USP36-222	ENST00000592275	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
USP36-222	ENST00000592275	LTBP1	Q14766	1721 aa		18.86	■□□□□ 0.61
USP36-222	ENST00000592275	NPHP1	O15259	732 aa		18.85	■□□□□ 0.61
USP36-222	ENST00000592275	TAF7	Q15545	349 aa	Predicted RBP	18.85	■□□□□ 0.61
USP36-222	ENST00000592275	CCDC93	Q567U6	631 aa		18.85	■□□□□ 0.61
USP36-222	ENST00000592275	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.84	■□□□□ 0.61
USP36-222	ENST00000592275	ZNF541	Q9H0D2	1346 aa		18.84	■□□□□ 0.61
USP36-222	ENST00000592275	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
USP36-222	ENST00000592275	OLFM4	Q6UX06	510 aa		18.84	■□□□□ 0.61
USP36-222	ENST00000592275	MIS18A	Q9NYP9	233 aa		18.84	■□□□□ 0.61
USP36-222	ENST00000592275	PASK	Q96RG2	1323 aa		18.83	■□□□□ 0.61
USP36-222	ENST00000592275	CRY2	Q49AN0	593 aa		18.83	■□□□□ 0.6
USP36-222	ENST00000592275	CHADL	Q6NUI6	762 aa		18.83	■□□□□ 0.6
USP36-222	ENST00000592275	TPTE2	Q6XPS3	522 aa		18.83	■□□□□ 0.6
USP36-222	ENST00000592275	HSPA1A	P0DMV8	641 aa	Known RBP	18.82	■□□□□ 0.6
USP36-222	ENST00000592275	HSPA1B	P0DMV9	641 aa	Known RBP	18.82	■□□□□ 0.6
USP36-222	ENST00000592275	EIF4A1	P60842	406 aa	Known RBP	18.81	■□□□□ 0.6
USP36-222	ENST00000592275	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.81	■□□□□ 0.6
USP36-222	ENST00000592275	CREBZF	Q9NS37	354 aa		18.81	■□□□□ 0.6
USP36-222	ENST00000592275	MAP3K15	Q6ZN16	1313 aa		18.8	■□□□□ 0.6
USP36-222	ENST00000592275	UBN2	Q6ZU65	1347 aa		18.8	■□□□□ 0.6
USP36-222	ENST00000592275	ERVV-1	B6SEH8	477 aa		18.8	■□□□□ 0.6
USP36-222	ENST00000592275	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.8	■□□□□ 0.6
USP36-222	ENST00000592275	TTLL7	Q6ZT98	887 aa		18.79	■□□□□ 0.6
USP36-222	ENST00000592275	PNISR	Q8TF01	805 aa	Known RBP	18.79	■□□□□ 0.6
USP36-222	ENST00000592275	THUMPD2	Q9BTF0	503 aa	Known RBP	18.79	■□□□□ 0.6
USP36-222	ENST00000592275	THSD7B	Q9C0I4	1608 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	IQCA1L	A6NCM1	817 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	FAM177B	A6PVY3	158 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	NFE2L2	Q16236	605 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	LRP10	Q7Z4F1	713 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	LDHD	Q86WU2	507 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	CNTNAP1	P78357	1384 aa		18.78	■□□□□ 0.6
USP36-222	ENST00000592275	FZD9	O00144	591 aa		18.77	■□□□□ 0.6
USP36-222	ENST00000592275	SLC51A	Q86UW1	340 aa		18.77	■□□□□ 0.6
USP36-222	ENST00000592275	NUTM1	Q86Y26	1132 aa		18.77	■□□□□ 0.6
USP36-222	ENST00000592275	RTKN2	Q8IZC4	609 aa		18.77	■□□□□ 0.6
USP36-222	ENST00000592275	TRPM7	Q96QT4	1865 aa		18.77	■□□□□ 0.6
USP36-222	ENST00000592275	ITGBL1	O95965	494 aa	Predicted RBP	18.76	■□□□□ 0.59
USP36-222	ENST00000592275	IARS	P41252	1262 aa	Known RBP	18.76	■□□□□ 0.59
USP36-222	ENST00000592275	PSMD1	Q99460	953 aa		18.76	■□□□□ 0.59
USP36-222	ENST00000592275	ERBB4	Q15303	1308 aa		18.75	■□□□□ 0.59
USP36-222	ENST00000592275	NTSR2	O95665	410 aa		18.75	■□□□□ 0.59
USP36-222	ENST00000592275	ALDH1B1	P30837	517 aa		18.75	■□□□□ 0.59
USP36-222	ENST00000592275	HOXA10	P31260	410 aa	Predicted RBP	18.75	■□□□□ 0.59
USP36-222	ENST00000592275	SYNE4	Q8N205	404 aa		18.75	■□□□□ 0.59
USP36-222	ENST00000592275	NYX	Q9GZU5	481 aa		18.75	■□□□□ 0.59
USP36-222	ENST00000592275	LRRC37A	A6NMS7	1700 aa		18.74	■□□□□ 0.59
USP36-222	ENST00000592275	TAF1	P21675	1872 aa		18.74	■□□□□ 0.59
USP36-222	ENST00000592275	SUSD4	Q5VX71	490 aa		18.74	■□□□□ 0.59
USP36-222	ENST00000592275	ZNF34	Q8IZ26	560 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms