RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 TBC1D9BQ66K14 1250 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 PRR5LQ6MZQ0 368 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
CXXC1-217ENST00000592078 POTECB2RU33 542 aa20.35■□□□□ 0.85
CXXC1-217ENST00000592078 C21orf2O43822 256 aa20.35■□□□□ 0.85
CXXC1-217ENST00000592078 MASTLQ96GX5 879 aa20.35■□□□□ 0.85
CXXC1-217ENST00000592078 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
CXXC1-217ENST00000592078 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
CXXC1-217ENST00000592078 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
CXXC1-217ENST00000592078 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
CXXC1-217ENST00000592078 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.85
CXXC1-217ENST00000592078 SRGNP10124 158 aa20.32■□□□□ 0.84
CXXC1-217ENST00000592078 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
CXXC1-217ENST00000592078 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
CXXC1-217ENST00000592078 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
CXXC1-217ENST00000592078 TBC1D2BQ9UPU7 963 aa20.32■□□□□ 0.84
CXXC1-217ENST00000592078 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
CXXC1-217ENST00000592078 FER1L6Q2WGJ9 1857 aa20.31■□□□□ 0.84
CXXC1-217ENST00000592078 SCN7AQ01118 1682 aa20.31■□□□□ 0.84
CXXC1-217ENST00000592078 LDHDQ86WU2 507 aa20.3■□□□□ 0.84
CXXC1-217ENST00000592078 L3MBTL3Q96JM7 780 aaPredicted RBP20.3■□□□□ 0.84
CXXC1-217ENST00000592078 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
CXXC1-217ENST00000592078 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
CXXC1-217ENST00000592078 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
CXXC1-217ENST00000592078 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
CXXC1-217ENST00000592078 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
CXXC1-217ENST00000592078 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
CXXC1-217ENST00000592078 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
CXXC1-217ENST00000592078 NPR1P16066 1061 aa20.28■□□□□ 0.84
CXXC1-217ENST00000592078 TPTE2Q6XPS3 522 aa20.28■□□□□ 0.84
CXXC1-217ENST00000592078 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
CXXC1-217ENST00000592078 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
CXXC1-217ENST00000592078 CAPN15O75808 1086 aa20.27■□□□□ 0.84
CXXC1-217ENST00000592078 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
CXXC1-217ENST00000592078 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
CXXC1-217ENST00000592078 PRDM10Q9NQV6 1147 aa20.27■□□□□ 0.84
CXXC1-217ENST00000592078 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 DDNO94850 711 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 A1BGP04217 495 aa20.26■□□□□ 0.83
CXXC1-217ENST00000592078 SNRPA1P09661 255 aaKnown RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
CXXC1-217ENST00000592078 PNMA8AQ86V59 439 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
CXXC1-217ENST00000592078 ZNF219Q9P2Y4 722 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-217ENST00000592078 SCN4AP35499 1836 aa20.25■□□□□ 0.83
CXXC1-217ENST00000592078 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
CXXC1-217ENST00000592078 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
CXXC1-217ENST00000592078 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
CXXC1-217ENST00000592078 CNTNAP1P78357 1384 aa20.24■□□□□ 0.83
CXXC1-217ENST00000592078 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
CXXC1-217ENST00000592078 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
CXXC1-217ENST00000592078 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
CXXC1-217ENST00000592078 AIDAQ96BJ3 306 aa20.24■□□□□ 0.83
CXXC1-217ENST00000592078 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
CXXC1-217ENST00000592078 SIPA1L3O60292 1781 aaPredicted RBP20.23■□□□□ 0.83
CXXC1-217ENST00000592078 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
CXXC1-217ENST00000592078 TMEM88BA6NKF7 163 aa20.23■□□□□ 0.83
CXXC1-217ENST00000592078 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
CXXC1-217ENST00000592078 TAF1DQ9H5J8 278 aaPredicted RBP20.23■□□□□ 0.83
CXXC1-217ENST00000592078 APAF1O14727 1248 aa20.22■□□□□ 0.83
CXXC1-217ENST00000592078 CTCFP49711 727 aaPredicted RBP20.22■□□□□ 0.83
CXXC1-217ENST00000592078 MKRN1Q9UHC7 482 aaKnown RBP20.22■□□□□ 0.83
CXXC1-217ENST00000592078 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
CXXC1-217ENST00000592078 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
CXXC1-217ENST00000592078 COL11A2P13942 1736 aaPredicted RBP20.21■□□□□ 0.83
CXXC1-217ENST00000592078 NFE2L2Q16236 605 aa20.2■□□□□ 0.82
CXXC1-217ENST00000592078 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
CXXC1-217ENST00000592078 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
CXXC1-217ENST00000592078 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 SLX4Q8IY92 1834 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 NEFMP07197 916 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 NIP7Q9Y221 180 aaKnown RBP eCLIP20.19■□□□□ 0.82
CXXC1-217ENST00000592078 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
CXXC1-217ENST00000592078 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
CXXC1-217ENST00000592078 GPC2Q8N158 579 aa20.18■□□□□ 0.82
CXXC1-217ENST00000592078 JDP2Q8WYK2 163 aa20.18■□□□□ 0.82
CXXC1-217ENST00000592078 ITGBL1O95965 494 aaPredicted RBP20.17■□□□□ 0.82
CXXC1-217ENST00000592078 EPHX2P34913 555 aa20.17■□□□□ 0.82
CXXC1-217ENST00000592078 PSMD1Q99460 953 aa20.17■□□□□ 0.82
CXXC1-217ENST00000592078 PCNTO95613 3336 aa20.17■□□□□ 0.82
CXXC1-217ENST00000592078 FZD9O00144 591 aa20.16■□□□□ 0.82
CXXC1-217ENST00000592078 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
CXXC1-217ENST00000592078 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
CXXC1-217ENST00000592078 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
CXXC1-217ENST00000592078 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
CXXC1-217ENST00000592078 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
CXXC1-217ENST00000592078 CLEC11AQ9Y240 323 aa20.16■□□□□ 0.82
CXXC1-217ENST00000592078 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
CXXC1-217ENST00000592078 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
CXXC1-217ENST00000592078 EAPPQ56P03 285 aaPredicted RBP20.15■□□□□ 0.82
CXXC1-217ENST00000592078 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
CXXC1-217ENST00000592078 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
CXXC1-217ENST00000592078 RASSF10A6NK89 507 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms