RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 BTAF1O14981 1849 aa14.3□□□□□ -0.12
TUBD1-211ENST00000591548 BRWD3Q6RI45 1802 aa14.3□□□□□ -0.12
TUBD1-211ENST00000591548 GNAI2P04899 355 aa14.3□□□□□ -0.12
TUBD1-211ENST00000591548 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
TUBD1-211ENST00000591548 ANKRD44Q8N8A2 993 aa14.3□□□□□ -0.12
TUBD1-211ENST00000591548 SBF2Q86WG5 1849 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-211ENST00000591548 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-211ENST00000591548 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 MYD88Q99836 296 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-211ENST00000591548 ZBTB1Q9Y2K1 713 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
TUBD1-211ENST00000591548 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
TUBD1-211ENST00000591548 INTS5Q6P9B9 1019 aaKnown RBP14.28□□□□□ -0.12
TUBD1-211ENST00000591548 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
TUBD1-211ENST00000591548 ZNF831Q5JPB2 1677 aa14.28□□□□□ -0.12
TUBD1-211ENST00000591548 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
TUBD1-211ENST00000591548 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
TUBD1-211ENST00000591548 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.12
TUBD1-211ENST00000591548 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.12
TUBD1-211ENST00000591548 ZNF330Q9Y3S2 320 aaPredicted RBP14.27□□□□□ -0.12
TUBD1-211ENST00000591548 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.12
TUBD1-211ENST00000591548 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.13
TUBD1-211ENST00000591548 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
TUBD1-211ENST00000591548 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 RREB1Q92766 1687 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 RXRBP28702 533 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 IL6STP40189 918 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-211ENST00000591548 KCNQ4P56696 695 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 GCKRQ14397 625 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-211ENST00000591548 C9orf78Q9NZ63 289 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-211ENST00000591548 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 UTYO14607 1347 aa14.26□□□□□ -0.13
TUBD1-211ENST00000591548 COL5A3P25940 1745 aaPredicted RBP14.25□□□□□ -0.13
TUBD1-211ENST00000591548 EP400Q96L91 3159 aa14.25□□□□□ -0.13
TUBD1-211ENST00000591548 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
TUBD1-211ENST00000591548 GRM8O00222 908 aa14.25□□□□□ -0.13
TUBD1-211ENST00000591548 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
TUBD1-211ENST00000591548 LINC00116Q8NCU8 138 aa14.25□□□□□ -0.13
TUBD1-211ENST00000591548 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
TUBD1-211ENST00000591548 POTEAQ6S8J7 498 aa14.24□□□□□ -0.13
TUBD1-211ENST00000591548 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
TUBD1-211ENST00000591548 DCTPP1Q9H773 170 aa14.24□□□□□ -0.13
TUBD1-211ENST00000591548 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
TUBD1-211ENST00000591548 MAP3K15Q6ZN16 1313 aa14.23□□□□□ -0.13
TUBD1-211ENST00000591548 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
TUBD1-211ENST00000591548 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
TUBD1-211ENST00000591548 NUCB1Q02818 461 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 ARXQ96QS3 562 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 LY75O60449 1722 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 AFDNP55196 1824 aaKnown RBP14.22□□□□□ -0.13
TUBD1-211ENST00000591548 HMMRO75330 724 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
TUBD1-211ENST00000591548 RGS3P49796 1198 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 HLFQ16534 295 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
TUBD1-211ENST00000591548 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 ISCA1Q9BUE6 129 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
TUBD1-211ENST00000591548 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
TUBD1-211ENST00000591548 TRIM37O94972 964 aa14.21□□□□□ -0.14
TUBD1-211ENST00000591548 PPP1R42Q7Z4L9 355 aa14.21□□□□□ -0.14
TUBD1-211ENST00000591548 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.14
TUBD1-211ENST00000591548 SSH3Q8TE77 659 aa14.21□□□□□ -0.14
TUBD1-211ENST00000591548 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.14
TUBD1-211ENST00000591548 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 A0A087WZG4 1122 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 CASP7P55210 303 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 TRIM28Q13263 835 aaKnown RBP14.2□□□□□ -0.14
TUBD1-211ENST00000591548 MTX1Q13505 466 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 POLA2Q14181 598 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 CWC25Q9NXE8 425 aaPredicted RBP14.2□□□□□ -0.14
TUBD1-211ENST00000591548 HDAC5Q9UQL6 1122 aa14.2□□□□□ -0.14
TUBD1-211ENST00000591548 H7C1W4 665 aa14.19□□□□□ -0.14
TUBD1-211ENST00000591548 PDE4AP27815 886 aa14.19□□□□□ -0.14
TUBD1-211ENST00000591548 RC3H1Q5TC82 1133 aaKnown RBP14.19□□□□□ -0.14
TUBD1-211ENST00000591548 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
TUBD1-211ENST00000591548 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
TUBD1-211ENST00000591548 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
TUBD1-211ENST00000591548 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
TUBD1-211ENST00000591548 EPHA10Q5JZY3 1008 aa14.18□□□□□ -0.14
TUBD1-211ENST00000591548 LNPKQ9C0E8 428 aa14.18□□□□□ -0.14
TUBD1-211ENST00000591548 BICC1Q9H694 974 aaKnown RBP14.18□□□□□ -0.14
TUBD1-211ENST00000591548 LRRC4BQ9NT99 713 aa14.18□□□□□ -0.14
TUBD1-211ENST00000591548 COL15A1P39059 1388 aa14.18□□□□□ -0.14
TUBD1-211ENST00000591548 TAF1LQ8IZX4 1826 aa14.17□□□□□ -0.14
TUBD1-211ENST00000591548 NUP98P52948 1817 aa14.17□□□□□ -0.14
TUBD1-211ENST00000591548 CAMTA2O94983 1202 aa14.17□□□□□ -0.14
TUBD1-211ENST00000591548 HSP90AB3PQ58FF7 597 aa14.17□□□□□ -0.14
TUBD1-211ENST00000591548 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
TUBD1-211ENST00000591548 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms