RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 SSH3Q8TE77 659 aa17.27■□□□□ 0.36
PRKCSH-212ENST00000591462 TTC14Q96N46 770 aa17.27■□□□□ 0.36
PRKCSH-212ENST00000591462 C8orf37Q96NL8 207 aa17.27■□□□□ 0.35
PRKCSH-212ENST00000591462 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-212ENST00000591462 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.35
PRKCSH-212ENST00000591462 RAD50Q92878 1312 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 DYNC1I1O14576 645 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 MEX3CQ5U5Q3 659 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
PRKCSH-212ENST00000591462 SGSM2O43147 1006 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 PHF14O94880 888 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 KIAA2012Q0VF49 1180 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 ZNF830Q96NB3 372 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 USP25Q9UHP3 1055 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-212ENST00000591462 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 AK2P54819 239 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 GCP02774 474 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 ZSCAN22P10073 491 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 POLA2Q14181 598 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
PRKCSH-212ENST00000591462 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 AMPHP49418 695 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 DTNBO60941 627 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 SYT1P21579 422 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-212ENST00000591462 LARGE1O95461 756 aa17.22■□□□□ 0.35
PRKCSH-212ENST00000591462 CPA1P15085 419 aa17.22■□□□□ 0.35
PRKCSH-212ENST00000591462 STX6O43752 255 aa17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 ADCY5O95622 1261 aa17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 TTC12Q9H892 705 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 RAB11FIP3O75154 756 aa17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 RGS17Q9UGC6 210 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-212ENST00000591462 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 F13A1P00488 732 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 UBE2HP62256 183 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 FUCA2Q9BTY2 467 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 LIMCH1Q9UPQ0 1083 aa17.2■□□□□ 0.34
PRKCSH-212ENST00000591462 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 FIBPO43427 364 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 TAF7Q15545 349 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 MYRIPQ8NFW9 859 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 ARID3AQ99856 593 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 SLIT3O75094 1523 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 PRDM11Q9NQV5 511 aa17.19■□□□□ 0.34
PRKCSH-212ENST00000591462 AFF2P51816 1311 aa17.18■□□□□ 0.34
PRKCSH-212ENST00000591462 AP5Z1O43299 807 aa17.18■□□□□ 0.34
PRKCSH-212ENST00000591462 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.341e-10■□□□□ 9.6
PRKCSH-212ENST00000591462 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
PRKCSH-212ENST00000591462 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 TSC1Q92574 1164 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 SMC3Q9UQE7 1217 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 CASTP20810 708 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 HOXC9P31274 260 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-212ENST00000591462 KDM4AO75164 1064 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 PTH1RQ03431 593 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 NFAT5O94916 1531 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 DNM1Q05193 864 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 MTMR6Q9Y217 621 aa17.16■□□□□ 0.34
PRKCSH-212ENST00000591462 GJB2P29033 226 aa17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 MTERF4Q7Z6M4 381 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms