RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
MBD1-224ENST00000591416 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
MBD1-224ENST00000591416 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
MBD1-224ENST00000591416 UPF3BQ9BZI7 483 aaKnown RBP18.48■□□□□ 0.55
MBD1-224ENST00000591416 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
MBD1-224ENST00000591416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.48■□□□□ 0.55
MBD1-224ENST00000591416 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
MBD1-224ENST00000591416 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
MBD1-224ENST00000591416 USP6P35125 1406 aa18.48■□□□□ 0.55
MBD1-224ENST00000591416 CDKL5O76039 1030 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 CWF19L2Q2TBE0 894 aaKnown RBP18.47■□□□□ 0.55
MBD1-224ENST00000591416 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 NAPBQ9H115 298 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 DZIP1Q86YF9 867 aaKnown RBP18.47■□□□□ 0.55
MBD1-224ENST00000591416 SDF4Q9BRK5 362 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
MBD1-224ENST00000591416 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 GOLIM4O00461 696 aa18.47■□□□□ 0.55
MBD1-224ENST00000591416 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
MBD1-224ENST00000591416 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 IL15P40933 162 aaPredicted RBP18.46■□□□□ 0.55
MBD1-224ENST00000591416 FIBPO43427 364 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 TPM2P07951 284 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 CEP85Q6P2H3 762 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 NLRP3Q96P20 1036 aa18.46■□□□□ 0.55
MBD1-224ENST00000591416 PDIA4P13667 645 aaKnown RBP18.45■□□□□ 0.54
MBD1-224ENST00000591416 G2E3Q7L622 706 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 ANKRD20A12PQ8NF67 263 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 PDE1AP54750 535 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 STK38Q15208 465 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
MBD1-224ENST00000591416 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
MBD1-224ENST00000591416 TRAK2O60296 914 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 UQCRFS1P1P0C7P4 283 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 ST5P78524 1137 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
MBD1-224ENST00000591416 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 TPM3P06753 285 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 TPM1P09493 284 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 SPHKAPQ2M3C7 1700 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 PRPF40AO75400 957 aaKnown RBP18.44■□□□□ 0.54
MBD1-224ENST00000591416 USP5P45974 858 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
MBD1-224ENST00000591416 ANKRD18AQ8IVF6 992 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
MBD1-224ENST00000591416 CCDC43Q96MW1 224 aaKnown RBP18.44■□□□□ 0.54
MBD1-224ENST00000591416 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
MBD1-224ENST00000591416 HMGB1P09429 215 aaKnown RBP18.43■□□□□ 0.54
MBD1-224ENST00000591416 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
MBD1-224ENST00000591416 MINDY4BA8MYZ0 360 aa18.43■□□□□ 0.54
MBD1-224ENST00000591416 KINO60870 393 aaKnown RBP18.42■□□□□ 0.54
MBD1-224ENST00000591416 KRT85P78386 507 aa18.42■□□□□ 0.54
MBD1-224ENST00000591416 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
MBD1-224ENST00000591416 SLF2Q8IX21 1173 aa18.42■□□□□ 0.54
MBD1-224ENST00000591416 LMTK2Q8IWU2 1503 aa18.42■□□□□ 0.54
MBD1-224ENST00000591416 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
MBD1-224ENST00000591416 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 ZNF213O14771 459 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 SDSP20132 328 aa18.41■□□□□ 0.54
MBD1-224ENST00000591416 PA2G4Q9UQ80 394 aaKnown RBP18.41■□□□□ 0.54
MBD1-224ENST00000591416 POLR3DP05423 398 aaPredicted RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 LDHCP07864 332 aa18.4■□□□□ 0.54
MBD1-224ENST00000591416 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 CAVIN1Q6NZI2 390 aaKnown RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 SH2B1Q9NRF2 756 aaPredicted RBP18.4■□□□□ 0.54
MBD1-224ENST00000591416 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.54
MBD1-224ENST00000591416 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.54
MBD1-224ENST00000591416 IL17REQ8NFR9 667 aa18.39■□□□□ 0.54
MBD1-224ENST00000591416 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.54
MBD1-224ENST00000591416 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.54
MBD1-224ENST00000591416 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
MBD1-224ENST00000591416 METTL22Q9BUU2 404 aaPredicted RBP18.39■□□□□ 0.53
MBD1-224ENST00000591416 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
MBD1-224ENST00000591416 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
MBD1-224ENST00000591416 FAM98CQ17RN3 349 aaKnown RBP18.39■□□□□ 0.53
MBD1-224ENST00000591416 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
MBD1-224ENST00000591416 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
MBD1-224ENST00000591416 WASF1Q92558 559 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 PHKG2P15735 406 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 TXLNAP40222 546 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 ZFYP08048 801 aaPredicted RBP18.38■□□□□ 0.53
MBD1-224ENST00000591416 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 NAT10Q9H0A0 1025 aaKnown RBP18.38■□□□□ 0.53
MBD1-224ENST00000591416 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
MBD1-224ENST00000591416 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms