RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 NBPF10Q6P3W6 841 aaKnown RBP28.89■■■□□ 2.22
DDX39A-215ENST00000590696 NBPF15Q8N660 670 aa28.89■■■□□ 2.22
DDX39A-215ENST00000590696 ZNF652Q9Y2D9 606 aa28.88■■■□□ 2.21
DDX39A-215ENST00000590696 NBPF5PQ86XG9 351 aaPredicted RBP28.87■■■□□ 2.21
DDX39A-215ENST00000590696 DNAJC5GQ8N7S2 189 aa28.87■■■□□ 2.21
DDX39A-215ENST00000590696 SRGNP10124 158 aa28.86■■■□□ 2.21
DDX39A-215ENST00000590696 STYK1Q6J9G0 422 aa28.86■■■□□ 2.21
DDX39A-215ENST00000590696 CNKSR1Q969H4 720 aa28.86■■■□□ 2.21
DDX39A-215ENST00000590696 PLEKHF1Q96S99 279 aa28.86■■■□□ 2.21
DDX39A-215ENST00000590696 TIAM2Q8IVF5 1701 aa28.86■■■□□ 2.21
DDX39A-215ENST00000590696 MASTLQ96GX5 879 aa28.85■■■□□ 2.21
DDX39A-215ENST00000590696 DLG5Q8TDM6 1919 aa28.84■■■□□ 2.21
DDX39A-215ENST00000590696 PNISRQ8TF01 805 aaKnown RBP28.84■■■□□ 2.21
DDX39A-215ENST00000590696 WDR90Q96KV7 1748 aa28.83■■■□□ 2.21
DDX39A-215ENST00000590696 VEGFAP15692 232 aaPredicted RBP28.83■■■□□ 2.21
DDX39A-215ENST00000590696 NIP7Q9Y221 180 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDX39A-215ENST00000590696 FER1L6Q2WGJ9 1857 aa28.83■■■□□ 2.2
DDX39A-215ENST00000590696 NFE2L2Q16236 605 aa28.82■■■□□ 2.2
DDX39A-215ENST00000590696 PRPF40BQ6NWY9 871 aaKnown RBP28.82■■■□□ 2.2
DDX39A-215ENST00000590696 SMC1BQ8NDV3 1235 aa28.82■■■□□ 2.2
DDX39A-215ENST00000590696 SLX4Q8IY92 1834 aa28.82■■■□□ 2.2
DDX39A-215ENST00000590696 RGL2O15211 777 aa28.81■■■□□ 2.2
DDX39A-215ENST00000590696 HTRA3P83110 453 aa28.81■■■□□ 2.2
DDX39A-215ENST00000590696 ERFEQ4G0M1 354 aa28.81■■■□□ 2.2
DDX39A-215ENST00000590696 TPTE2Q6XPS3 522 aa28.81■■■□□ 2.2
DDX39A-215ENST00000590696 CACNA1SQ13698 1873 aa28.8■■■□□ 2.2
DDX39A-215ENST00000590696 HLFQ16534 295 aa28.8■■■□□ 2.2
DDX39A-215ENST00000590696 DPY19L2Q6NUT2 758 aa28.8■■■□□ 2.2
DDX39A-215ENST00000590696 TAOK3Q9H2K8 898 aa28.8■■■□□ 2.2
DDX39A-215ENST00000590696 LTBP3Q9NS15 1303 aa28.79■■■□□ 2.2
DDX39A-215ENST00000590696 FAM177BA6PVY3 158 aa28.79■■■□□ 2.2
DDX39A-215ENST00000590696 IFFO2Q5TF58 517 aa28.79■■■□□ 2.2
DDX39A-215ENST00000590696 THUMPD2Q9BTF0 503 aaKnown RBP28.79■■■□□ 2.2
DDX39A-215ENST00000590696 PNNQ9H307 717 aaKnown RBP28.79■■■□□ 2.2
DDX39A-215ENST00000590696 LAMB4A4D0S4 1761 aa28.79■■■□□ 2.2
DDX39A-215ENST00000590696 KDM3BQ7LBC6 1761 aa28.79■■■□□ 2.2
DDX39A-215ENST00000590696 EIF4A1P60842 406 aaKnown RBP28.78■■■□□ 2.2
DDX39A-215ENST00000590696 SOGA3Q5TF21 947 aa28.78■■■□□ 2.2
DDX39A-215ENST00000590696 NGEFQ8N5V2 710 aa28.78■■■□□ 2.2
DDX39A-215ENST00000590696 DICER1Q9UPY3 1922 aaKnown RBP28.77■■■□□ 2.2
DDX39A-215ENST00000590696 MAPK8IP3Q9UPT6 1336 aa28.77■■■□□ 2.2
DDX39A-215ENST00000590696 ARFGEF2Q9Y6D5 1785 aa28.77■■■□□ 2.2
DDX39A-215ENST00000590696 KLRG2A4D1S0 409 aaPredicted RBP28.76■■■□□ 2.19
DDX39A-215ENST00000590696 POTECB2RU33 542 aa28.76■■■□□ 2.19
DDX39A-215ENST00000590696 NPR1P16066 1061 aa28.76■■■□□ 2.19
DDX39A-215ENST00000590696 RRP7AQ9Y3A4 280 aaKnown RBP28.75■■■□□ 2.19
DDX39A-215ENST00000590696 C7orf43Q8WVR3 580 aa28.74■■■□□ 2.19
DDX39A-215ENST00000590696 GTF2E1P29083 439 aaPredicted RBP28.73■■■□□ 2.19
DDX39A-215ENST00000590696 KLRG1Q96E93 195 aa28.73■■■□□ 2.19
DDX39A-215ENST00000590696 ERVV-1B6SEH8 477 aa28.71■■■□□ 2.19
DDX39A-215ENST00000590696 MYL6BP14649 208 aa28.71■■■□□ 2.19
DDX39A-215ENST00000590696 CCDC93Q567U6 631 aa28.71■■■□□ 2.19
DDX39A-215ENST00000590696 MAP3K15Q6ZN16 1313 aa28.7■■■□□ 2.19
DDX39A-215ENST00000590696 TTLL7Q6ZT98 887 aa28.7■■■□□ 2.18
DDX39A-215ENST00000590696 DDNO94850 711 aaPredicted RBP28.69■■■□□ 2.18
DDX39A-215ENST00000590696 RALBP1Q15311 655 aa28.69■■■□□ 2.18
DDX39A-215ENST00000590696 KIF6Q6ZMV9 814 aa28.69■■■□□ 2.18
DDX39A-215ENST00000590696 NYXQ9GZU5 481 aa28.68■■■□□ 2.18
DDX39A-215ENST00000590696 NUP98P52948 1817 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 ALDH1B1P30837 517 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 RIPK4P57078 832 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 OLFM4Q6UX06 510 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 NUTM1Q86Y26 1132 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 TSPYL4Q9UJ04 414 aa28.67■■■□□ 2.18
DDX39A-215ENST00000590696 FKBP4Q02790 459 aaKnown RBP eCLIP28.66■■■□□ 2.18
DDX39A-215ENST00000590696 ZBTB3Q9H5J0 574 aa28.66■■■□□ 2.18
DDX39A-215ENST00000590696 JMYQ8N9B5 988 aa28.65■■■□□ 2.18
DDX39A-215ENST00000590696 GPTP24298 496 aa28.64■■■□□ 2.18
DDX39A-215ENST00000590696 RTKN2Q8IZC4 609 aa28.64■■■□□ 2.18
DDX39A-215ENST00000590696 ABCC12Q96J65 1359 aa28.63■■■□□ 2.17
DDX39A-215ENST00000590696 ZNF277Q9NRM2 450 aaPredicted RBP28.63■■■□□ 2.17
DDX39A-215ENST00000590696 ERBB4Q15303 1308 aa28.63■■■□□ 2.17
DDX39A-215ENST00000590696 CRY2Q49AN0 593 aa28.62■■■□□ 2.17
DDX39A-215ENST00000590696 UBN2Q6ZU65 1347 aa28.62■■■□□ 2.17
DDX39A-215ENST00000590696 TMPOP42166 694 aaKnown RBP28.61■■■□□ 2.17
DDX39A-215ENST00000590696 DDX10Q13206 875 aaKnown RBP28.61■■■□□ 2.17
DDX39A-215ENST00000590696 SUSD4Q5VX71 490 aa28.61■■■□□ 2.17
DDX39A-215ENST00000590696 EIF2S2P20042 333 aaKnown RBP28.6■■■□□ 2.17
DDX39A-215ENST00000590696 GIGYF2Q6Y7W6 1299 aaKnown RBP28.6■■■□□ 2.17
DDX39A-215ENST00000590696 ZNF34Q8IZ26 560 aa28.6■■■□□ 2.17
DDX39A-215ENST00000590696 POTEIP0CG38 1075 aa28.59■■■□□ 2.17
DDX39A-215ENST00000590696 POTEJP0CG39 1038 aa28.59■■■□□ 2.17
DDX39A-215ENST00000590696 CHADLQ6NUI6 762 aa28.59■■■□□ 2.17
DDX39A-215ENST00000590696 BABAM1Q9NWV8 329 aa28.59■■■□□ 2.17
DDX39A-215ENST00000590696 LMOD3Q0VAK6 560 aa28.58■■■□□ 2.17
DDX39A-215ENST00000590696 PDIA6Q15084 440 aa28.58■■■□□ 2.17
DDX39A-215ENST00000590696 SYNE4Q8N205 404 aa28.58■■■□□ 2.17
DDX39A-215ENST00000590696 IBTKQ9P2D0 1353 aaPredicted RBP28.58■■■□□ 2.17
DDX39A-215ENST00000590696 IQCA1LA6NCM1 817 aa28.57■■■□□ 2.16
DDX39A-215ENST00000590696 LRP10Q7Z4F1 713 aa28.57■■■□□ 2.16
DDX39A-215ENST00000590696 RPGRQ92834 1020 aaKnown RBP28.57■■■□□ 2.16
DDX39A-215ENST00000590696 L3MBTL3Q96JM7 780 aaPredicted RBP28.57■■■□□ 2.16
DDX39A-215ENST00000590696 MYBBP1AQ9BQG0 1328 aaKnown RBP28.57■■■□□ 2.16
DDX39A-215ENST00000590696 NTSR2O95665 410 aa28.56■■■□□ 2.16
DDX39A-215ENST00000590696 IARSP41252 1262 aaKnown RBP28.56■■■□□ 2.16
DDX39A-215ENST00000590696 ZNF541Q9H0D2 1346 aa28.56■■■□□ 2.16
DDX39A-215ENST00000590696 RIC1Q4ADV7 1423 aa28.55■■■□□ 2.16
DDX39A-215ENST00000590696 HOXA10P31260 410 aaPredicted RBP28.55■■■□□ 2.16
DDX39A-215ENST00000590696 NEUROD2Q15784 382 aa28.55■■■□□ 2.16
DDX39A-215ENST00000590696 PPP1R42Q7Z4L9 355 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms