RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 KCNQ3O43525 872 aa21.4■■□□□ 1.02
GCDH-213ENST00000590627 STARD3NLO95772 234 aa21.4■■□□□ 1.02
GCDH-213ENST00000590627 CT47B1P0C2W7 299 aaPredicted RBP21.4■■□□□ 1.02
GCDH-213ENST00000590627 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
GCDH-213ENST00000590627 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
GCDH-213ENST00000590627 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.02
GCDH-213ENST00000590627 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
GCDH-213ENST00000590627 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
GCDH-213ENST00000590627 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
GCDH-213ENST00000590627 SERPINB2P05120 415 aa21.37■■□□□ 1.01
GCDH-213ENST00000590627 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
GCDH-213ENST00000590627 C8orf58Q8NAV2 365 aa21.37■■□□□ 1.01
GCDH-213ENST00000590627 SBF1O95248 1867 aa21.37■■□□□ 1.01
GCDH-213ENST00000590627 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
GCDH-213ENST00000590627 A0A087WZG4 1122 aa21.36■■□□□ 1.01
GCDH-213ENST00000590627 HOXB7P09629 217 aa21.36■■□□□ 1.01
GCDH-213ENST00000590627 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
GCDH-213ENST00000590627 APLP1P51693 650 aa21.36■■□□□ 1.01
GCDH-213ENST00000590627 RNF181Q9P0P0 153 aa21.36■■□□□ 1.01
GCDH-213ENST00000590627 KDM2BQ8NHM5 1336 aa21.35■■□□□ 1.01
GCDH-213ENST00000590627 TSPYL6Q8N831 410 aa21.35■■□□□ 1.01
GCDH-213ENST00000590627 ZNF428Q96B54 188 aa21.35■■□□□ 1.01
GCDH-213ENST00000590627 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
GCDH-213ENST00000590627 FMNL2Q96PY5 1086 aa21.35■■□□□ 1.01
GCDH-213ENST00000590627 VAMP4O75379 141 aa21.34■■□□□ 1.01
GCDH-213ENST00000590627 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
GCDH-213ENST00000590627 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
GCDH-213ENST00000590627 RBM46Q8TBY0 533 aaKnown RBP21.34■■□□□ 1.01
GCDH-213ENST00000590627 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
GCDH-213ENST00000590627 IFFO2Q5TF58 517 aa21.32■■□□□ 1
GCDH-213ENST00000590627 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
GCDH-213ENST00000590627 SCN7AQ01118 1682 aa21.31■■□□□ 1
GCDH-213ENST00000590627 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
GCDH-213ENST00000590627 IL6STP40189 918 aaPredicted RBP21.31■■□□□ 1
GCDH-213ENST00000590627 TTLL6Q8N841 843 aa21.31■■□□□ 1
GCDH-213ENST00000590627 H0YIN7 160 aa21.3■■□□□ 1
GCDH-213ENST00000590627 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
GCDH-213ENST00000590627 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
GCDH-213ENST00000590627 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
GCDH-213ENST00000590627 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
GCDH-213ENST00000590627 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
GCDH-213ENST00000590627 CARMIL3Q8ND23 1372 aa21.29■■□□□ 1
GCDH-213ENST00000590627 FSTL1Q12841 308 aa21.29■■□□□ 1
GCDH-213ENST00000590627 BICDL1Q6ZP65 573 aa21.29■■□□□ 1
GCDH-213ENST00000590627 C2CD5Q86YS7 1000 aa21.29■■□□□ 1
GCDH-213ENST00000590627 LMNB1P20700 586 aa21.28■■□□□ 1
GCDH-213ENST00000590627 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
GCDH-213ENST00000590627 TBC1D9BQ66K14 1250 aa21.28■■□□□ 1
GCDH-213ENST00000590627 RASSF7Q02833 373 aa21.27■■□□□ 1
GCDH-213ENST00000590627 ALDH1L2Q3SY69 923 aa21.27■■□□□ 1
GCDH-213ENST00000590627 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
GCDH-213ENST00000590627 DNAJC5GQ8N7S2 189 aa21.27■■□□□ 1
GCDH-213ENST00000590627 RRAGCQ9HB90 399 aa21.27■■□□□ 1
GCDH-213ENST00000590627 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
GCDH-213ENST00000590627 WDR90Q96KV7 1748 aa21.26■□□□□ 0.99
GCDH-213ENST00000590627 ANKRD31Q8N7Z5 1873 aa21.26■□□□□ 0.99
GCDH-213ENST00000590627 PDE6BP35913 854 aa21.26■□□□□ 0.99
GCDH-213ENST00000590627 BRIP1Q9BX63 1249 aa21.26■□□□□ 0.99
GCDH-213ENST00000590627 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
GCDH-213ENST00000590627 BRPF1P55201 1214 aaPredicted RBP21.25■□□□□ 0.99
GCDH-213ENST00000590627 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
GCDH-213ENST00000590627 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
GCDH-213ENST00000590627 A1BGP04217 495 aa21.24■□□□□ 0.99
GCDH-213ENST00000590627 PRR5LQ6MZQ0 368 aa21.24■□□□□ 0.99
GCDH-213ENST00000590627 SSH1Q8WYL5 1049 aa21.24■□□□□ 0.99
GCDH-213ENST00000590627 GLTPD2A6NH11 291 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 CAMTA2O94983 1202 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 PRELPP51888 382 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 HDGFL1Q5TGJ6 251 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 CCDC88AQ3V6T2 1871 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
GCDH-213ENST00000590627 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
GCDH-213ENST00000590627 NFKBIEO00221 500 aa21.22■□□□□ 0.99
GCDH-213ENST00000590627 SETDB2Q96T68 719 aa21.22■□□□□ 0.99
GCDH-213ENST00000590627 DZIP3Q86Y13 1208 aaKnown RBP21.21■□□□□ 0.99
GCDH-213ENST00000590627 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
GCDH-213ENST00000590627 ZNF622Q969S3 477 aaKnown RBP eCLIP21.21■□□□□ 0.99
GCDH-213ENST00000590627 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
GCDH-213ENST00000590627 COL11A2P13942 1736 aaPredicted RBP21.21■□□□□ 0.99
GCDH-213ENST00000590627 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
GCDH-213ENST00000590627 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
GCDH-213ENST00000590627 CNBD1Q8NA66 436 aa21.2■□□□□ 0.98
GCDH-213ENST00000590627 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.98
GCDH-213ENST00000590627 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
GCDH-213ENST00000590627 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
GCDH-213ENST00000590627 LAMB4A4D0S4 1761 aa21.19■□□□□ 0.98
GCDH-213ENST00000590627 BCAR3O75815 825 aa21.19■□□□□ 0.98
GCDH-213ENST00000590627 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
GCDH-213ENST00000590627 CLEC4GQ6UXB4 293 aa21.19■□□□□ 0.98
GCDH-213ENST00000590627 STK31Q9BXU1 1019 aa21.19■□□□□ 0.98
GCDH-213ENST00000590627 DBF4Q9UBU7 674 aaPredicted RBP21.19■□□□□ 0.98
GCDH-213ENST00000590627 DICER1Q9UPY3 1922 aaKnown RBP21.18■□□□□ 0.98
GCDH-213ENST00000590627 ST5P78524 1137 aa21.18■□□□□ 0.98
GCDH-213ENST00000590627 RGL2O15211 777 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 NPHP1O15259 732 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 C21orf2O43822 256 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 SLC4A2P04920 1241 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 PDIA6Q15084 440 aa21.17■□□□□ 0.98
GCDH-213ENST00000590627 CCDC24Q8N4L8 307 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms