RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 C21orf2O43822 256 aa23.74■■□□□ 1.39
PRKCSH-211ENST00000590098 NBPF5PQ86XG9 351 aaPredicted RBP23.74■■□□□ 1.39
PRKCSH-211ENST00000590098 CNKSR1Q969H4 720 aa23.74■■□□□ 1.39
PRKCSH-211ENST00000590098 ZNF219Q9P2Y4 722 aaPredicted RBP23.74■■□□□ 1.39
PRKCSH-211ENST00000590098 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
PRKCSH-211ENST00000590098 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
PRKCSH-211ENST00000590098 NFE2L2Q16236 605 aa23.73■■□□□ 1.39
PRKCSH-211ENST00000590098 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
PRKCSH-211ENST00000590098 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
PRKCSH-211ENST00000590098 PLEKHF1Q96S99 279 aa23.73■■□□□ 1.39
PRKCSH-211ENST00000590098 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
PRKCSH-211ENST00000590098 CACNA1SQ13698 1873 aa23.72■■□□□ 1.39
PRKCSH-211ENST00000590098 LAMB4A4D0S4 1761 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 TIAM2Q8IVF5 1701 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 GLTPD2A6NH11 291 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 RGL2O15211 777 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 SRGNP10124 158 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 HTRA3P83110 453 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 FSTL1Q12841 308 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 MASTLQ96GX5 879 aa23.71■■□□□ 1.39
PRKCSH-211ENST00000590098 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.39
PRKCSH-211ENST00000590098 TPTE2Q6XPS3 522 aa23.7■■□□□ 1.38
PRKCSH-211ENST00000590098 NIP7Q9Y221 180 aaKnown RBP eCLIP23.7■■□□□ 1.38
PRKCSH-211ENST00000590098 FER1L6Q2WGJ9 1857 aa23.7■■□□□ 1.38
PRKCSH-211ENST00000590098 SLX4Q8IY92 1834 aa23.69■■□□□ 1.38
PRKCSH-211ENST00000590098 RALBP1Q15311 655 aa23.68■■□□□ 1.38
PRKCSH-211ENST00000590098 SOGA3Q5TF21 947 aa23.68■■□□□ 1.38
PRKCSH-211ENST00000590098 PRPF40BQ6NWY9 871 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-211ENST00000590098 THUMPD2Q9BTF0 503 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-211ENST00000590098 DICER1Q9UPY3 1922 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-211ENST00000590098 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
PRKCSH-211ENST00000590098 DPY19L2Q6NUT2 758 aa23.67■■□□□ 1.38
PRKCSH-211ENST00000590098 NGEFQ8N5V2 710 aa23.67■■□□□ 1.38
PRKCSH-211ENST00000590098 TAOK3Q9H2K8 898 aa23.67■■□□□ 1.38
PRKCSH-211ENST00000590098 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
PRKCSH-211ENST00000590098 FAM177BA6PVY3 158 aa23.66■■□□□ 1.38
PRKCSH-211ENST00000590098 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-211ENST00000590098 ERFEQ4G0M1 354 aa23.66■■□□□ 1.38
PRKCSH-211ENST00000590098 LTBP3Q9NS15 1303 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 POTECB2RU33 542 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 NPR1P16066 1061 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 HLFQ16534 295 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 IFFO2Q5TF58 517 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 SMC1BQ8NDV3 1235 aa23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 RRP7AQ9Y3A4 280 aaKnown RBP23.65■■□□□ 1.38
PRKCSH-211ENST00000590098 WDR90Q96KV7 1748 aa23.64■■□□□ 1.38
PRKCSH-211ENST00000590098 KIF6Q6ZMV9 814 aa23.64■■□□□ 1.37
PRKCSH-211ENST00000590098 NUP98P52948 1817 aa23.62■■□□□ 1.37
PRKCSH-211ENST00000590098 ERVV-1B6SEH8 477 aa23.62■■□□□ 1.37
PRKCSH-211ENST00000590098 MYL6BP14649 208 aa23.62■■□□□ 1.37
PRKCSH-211ENST00000590098 RIPK4P57078 832 aa23.62■■□□□ 1.37
PRKCSH-211ENST00000590098 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
PRKCSH-211ENST00000590098 C7orf43Q8WVR3 580 aa23.61■■□□□ 1.37
PRKCSH-211ENST00000590098 NYXQ9GZU5 481 aa23.61■■□□□ 1.37
PRKCSH-211ENST00000590098 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
PRKCSH-211ENST00000590098 MAP3K15Q6ZN16 1313 aa23.6■■□□□ 1.37
PRKCSH-211ENST00000590098 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
PRKCSH-211ENST00000590098 CCDC93Q567U6 631 aa23.6■■□□□ 1.37
PRKCSH-211ENST00000590098 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
PRKCSH-211ENST00000590098 LMOD3Q0VAK6 560 aa23.58■■□□□ 1.37
PRKCSH-211ENST00000590098 TTLL7Q6ZT98 887 aa23.58■■□□□ 1.37
PRKCSH-211ENST00000590098 ERBB4Q15303 1308 aa23.58■■□□□ 1.36
PRKCSH-211ENST00000590098 OLFM4Q6UX06 510 aa23.57■■□□□ 1.36
PRKCSH-211ENST00000590098 KLRG1Q96E93 195 aa23.57■■□□□ 1.36
PRKCSH-211ENST00000590098 ZBTB3Q9H5J0 574 aa23.57■■□□□ 1.36
PRKCSH-211ENST00000590098 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-211ENST00000590098 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
PRKCSH-211ENST00000590098 MYBBP1AQ9BQG0 1328 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-211ENST00000590098 DDNO94850 711 aaPredicted RBP23.55■■□□□ 1.36
PRKCSH-211ENST00000590098 GPTP24298 496 aa23.55■■□□□ 1.36
PRKCSH-211ENST00000590098 FKBP4Q02790 459 aaKnown RBP eCLIP23.55■■□□□ 1.36
PRKCSH-211ENST00000590098 NUTM1Q86Y26 1132 aa23.55■■□□□ 1.36
PRKCSH-211ENST00000590098 RTKN2Q8IZC4 609 aa23.55■■□□□ 1.36
PRKCSH-211ENST00000590098 EIF2S2P20042 333 aaKnown RBP23.54■■□□□ 1.36
PRKCSH-211ENST00000590098 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 WDR43Q15061 677 aaKnown RBP eCLIP23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 GIGYF2Q6Y7W6 1299 aaKnown RBP23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 JMYQ8N9B5 988 aa23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 ZNF277Q9NRM2 450 aaPredicted RBP23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
PRKCSH-211ENST00000590098 NEUROD2Q15784 382 aa23.51■■□□□ 1.35
PRKCSH-211ENST00000590098 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
PRKCSH-211ENST00000590098 SUSD4Q5VX71 490 aa23.51■■□□□ 1.35
PRKCSH-211ENST00000590098 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
PRKCSH-211ENST00000590098 RPGRQ92834 1020 aaKnown RBP23.51■■□□□ 1.35
PRKCSH-211ENST00000590098 POTEIP0CG38 1075 aa23.5■■□□□ 1.35
PRKCSH-211ENST00000590098 POTEJP0CG39 1038 aa23.5■■□□□ 1.35
PRKCSH-211ENST00000590098 PPP1R42Q7Z4L9 355 aa23.5■■□□□ 1.35
PRKCSH-211ENST00000590098 ZNF34Q8IZ26 560 aa23.5■■□□□ 1.35
PRKCSH-211ENST00000590098 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
PRKCSH-211ENST00000590098 IQCA1LA6NCM1 817 aa23.48■■□□□ 1.35
PRKCSH-211ENST00000590098 PARP10Q53GL7 1025 aa23.48■■□□□ 1.35
PRKCSH-211ENST00000590098 SYNE4Q8N205 404 aa23.48■■□□□ 1.35
PRKCSH-211ENST00000590098 RUNDC1Q96C34 613 aa23.48■■□□□ 1.35
PRKCSH-211ENST00000590098 RIC1Q4ADV7 1423 aa23.48■■□□□ 1.35
PRKCSH-211ENST00000590098 HOXA10P31260 410 aaPredicted RBP23.47■■□□□ 1.35
PRKCSH-211ENST00000590098 IARSP41252 1262 aaKnown RBP23.47■■□□□ 1.35
PRKCSH-211ENST00000590098 PDIA6Q15084 440 aa23.47■■□□□ 1.35
PRKCSH-211ENST00000590098 CC2D2BQ6DHV5 1058 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms