RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
CXXC1-211ENST00000589548 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
CXXC1-211ENST00000589548 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
CXXC1-211ENST00000589548 GAS2L2Q8NHY3 880 aa24.2■■□□□ 1.46
CXXC1-211ENST00000589548 CNKSR1Q969H4 720 aa24.2■■□□□ 1.46
CXXC1-211ENST00000589548 FMNL2Q96PY5 1086 aa24.2■■□□□ 1.46
CXXC1-211ENST00000589548 ADAMTSL1Q8N6G6 1762 aa24.19■■□□□ 1.46
CXXC1-211ENST00000589548 PASKQ96RG2 1323 aa24.18■■□□□ 1.46
CXXC1-211ENST00000589548 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
CXXC1-211ENST00000589548 PIP4K2AP48426 406 aaPredicted RBP24.18■■□□□ 1.46
CXXC1-211ENST00000589548 ST5P78524 1137 aa24.18■■□□□ 1.46
CXXC1-211ENST00000589548 MASTLQ96GX5 879 aa24.18■■□□□ 1.46
CXXC1-211ENST00000589548 CNTNAP1P78357 1384 aa24.17■■□□□ 1.46
CXXC1-211ENST00000589548 DZIP3Q86Y13 1208 aaKnown RBP24.17■■□□□ 1.46
CXXC1-211ENST00000589548 C7orf43Q8WVR3 580 aa24.17■■□□□ 1.46
CXXC1-211ENST00000589548 PRAMEF22A3QJZ6 481 aa24.15■■□□□ 1.46
CXXC1-211ENST00000589548 NPHP1O15259 732 aa24.15■■□□□ 1.46
CXXC1-211ENST00000589548 SOGA3Q5TF21 947 aa24.15■■□□□ 1.46
CXXC1-211ENST00000589548 L3MBTL3Q96JM7 780 aaPredicted RBP24.15■■□□□ 1.46
CXXC1-211ENST00000589548 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
CXXC1-211ENST00000589548 FOXN1O15353 648 aa24.14■■□□□ 1.45
CXXC1-211ENST00000589548 PHACTR3Q96KR7 559 aa24.14■■□□□ 1.45
CXXC1-211ENST00000589548 TAF1DQ9H5J8 278 aaPredicted RBP24.14■■□□□ 1.45
CXXC1-211ENST00000589548 ZNF541Q9H0D2 1346 aa24.13■■□□□ 1.45
CXXC1-211ENST00000589548 LDHDQ86WU2 507 aa24.13■■□□□ 1.45
CXXC1-211ENST00000589548 NPC1L1Q9UHC9 1359 aa24.13■■□□□ 1.45
CXXC1-211ENST00000589548 IQCA1LA6NCM1 817 aa24.12■■□□□ 1.45
CXXC1-211ENST00000589548 BTBD11A6QL63 1104 aa24.12■■□□□ 1.45
CXXC1-211ENST00000589548 OLFM4Q6UX06 510 aa24.12■■□□□ 1.45
CXXC1-211ENST00000589548 NPM2Q86SE8 214 aaKnown RBP24.12■■□□□ 1.45
CXXC1-211ENST00000589548 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
CXXC1-211ENST00000589548 CCDC93Q567U6 631 aa24.11■■□□□ 1.45
CXXC1-211ENST00000589548 NBPF5PQ86XG9 351 aaPredicted RBP24.11■■□□□ 1.45
CXXC1-211ENST00000589548 ITGBL1O95965 494 aaPredicted RBP24.1■■□□□ 1.45
CXXC1-211ENST00000589548 RSPH6AQ9H0K4 717 aa24.1■■□□□ 1.45
CXXC1-211ENST00000589548 LAMB4A4D0S4 1761 aa24.09■■□□□ 1.45
CXXC1-211ENST00000589548 KLRG2A4D1S0 409 aaPredicted RBP24.09■■□□□ 1.45
CXXC1-211ENST00000589548 NPR1P16066 1061 aa24.09■■□□□ 1.45
CXXC1-211ENST00000589548 PRKAR2BP31323 418 aa24.09■■□□□ 1.45
CXXC1-211ENST00000589548 FKBP4Q02790 459 aaKnown RBP eCLIP24.09■■□□□ 1.45
CXXC1-211ENST00000589548 CLEC4GQ6UXB4 293 aa24.09■■□□□ 1.45
CXXC1-211ENST00000589548 ZNF277Q9NRM2 450 aaPredicted RBP24.09■■□□□ 1.45
CXXC1-211ENST00000589548 VEGFBP49765 207 aa24.08■■□□□ 1.45
CXXC1-211ENST00000589548 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
CXXC1-211ENST00000589548 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
CXXC1-211ENST00000589548 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
CXXC1-211ENST00000589548 SNED1Q8TER0 1413 aa24.07■■□□□ 1.44
CXXC1-211ENST00000589548 NUP98P52948 1817 aa24.06■■□□□ 1.44
CXXC1-211ENST00000589548 EAPPQ56P03 285 aaPredicted RBP24.06■■□□□ 1.44
CXXC1-211ENST00000589548 PRDM10Q9NQV6 1147 aa24.06■■□□□ 1.44
CXXC1-211ENST00000589548 LTBP1Q14766 1721 aa24.05■■□□□ 1.44
CXXC1-211ENST00000589548 TMEM88BA6NKF7 163 aa24.05■■□□□ 1.44
CXXC1-211ENST00000589548 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
CXXC1-211ENST00000589548 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
CXXC1-211ENST00000589548 COL4A5P29400 1685 aa24.05■■□□□ 1.44
CXXC1-211ENST00000589548 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
CXXC1-211ENST00000589548 MCM10Q7L590 875 aa24.04■■□□□ 1.44
CXXC1-211ENST00000589548 HACL1Q9UJ83 578 aa24.04■■□□□ 1.44
CXXC1-211ENST00000589548 NIP7Q9Y221 180 aaKnown RBP eCLIP24.04■■□□□ 1.44
CXXC1-211ENST00000589548 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
CXXC1-211ENST00000589548 FAM177BA6PVY3 158 aa24.03■■□□□ 1.44
CXXC1-211ENST00000589548 EPHX2P34913 555 aa24.03■■□□□ 1.44
CXXC1-211ENST00000589548 TPTE2Q6XPS3 522 aa24.02■■□□□ 1.44
CXXC1-211ENST00000589548 DLG5Q8TDM6 1919 aa24.02■■□□□ 1.44
CXXC1-211ENST00000589548 FZD9O00144 591 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 RGL2O15211 777 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 IARSP41252 1262 aaKnown RBP24.01■■□□□ 1.43
CXXC1-211ENST00000589548 CTCFP49711 727 aaPredicted RBP24.01■■□□□ 1.43
CXXC1-211ENST00000589548 HLFQ16534 295 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 RTKN2Q8IZC4 609 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 WBP1LQ9NX94 342 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
CXXC1-211ENST00000589548 DCTN1Q14203 1278 aa24■■□□□ 1.43
CXXC1-211ENST00000589548 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
CXXC1-211ENST00000589548 SYNE4Q8N205 404 aa24■■□□□ 1.43
CXXC1-211ENST00000589548 AIDAQ96BJ3 306 aa24■■□□□ 1.43
CXXC1-211ENST00000589548 CLEC11AQ9Y240 323 aa24■■□□□ 1.43
CXXC1-211ENST00000589548 THSD7BQ9C0I4 1608 aa23.99■■□□□ 1.43
CXXC1-211ENST00000589548 SLC34A2O95436 690 aa23.99■■□□□ 1.43
CXXC1-211ENST00000589548 TRPM7Q96QT4 1865 aa23.98■■□□□ 1.43
CXXC1-211ENST00000589548 RASSF10A6NK89 507 aa23.98■■□□□ 1.43
CXXC1-211ENST00000589548 LBX1P52954 281 aa23.98■■□□□ 1.43
CXXC1-211ENST00000589548 CNTROBQ8N137 903 aa23.98■■□□□ 1.43
CXXC1-211ENST00000589548 ALDH1B1P30837 517 aa23.96■■□□□ 1.43
CXXC1-211ENST00000589548 SLC51AQ86UW1 340 aa23.96■■□□□ 1.43
CXXC1-211ENST00000589548 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
CXXC1-211ENST00000589548 GPC2Q8N158 579 aa23.96■■□□□ 1.43
CXXC1-211ENST00000589548 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
CXXC1-211ENST00000589548 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
CXXC1-211ENST00000589548 HSPA8P11142 646 aaKnown RBP23.95■■□□□ 1.42
CXXC1-211ENST00000589548 CRY2Q49AN0 593 aa23.95■■□□□ 1.42
CXXC1-211ENST00000589548 PSMD1Q99460 953 aa23.95■■□□□ 1.42
CXXC1-211ENST00000589548 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
CXXC1-211ENST00000589548 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.42
CXXC1-211ENST00000589548 DEFB115Q30KQ5 88 aa23.94■■□□□ 1.42
CXXC1-211ENST00000589548 NUTM1Q86Y26 1132 aa23.94■■□□□ 1.42
CXXC1-211ENST00000589548 WDR33Q9C0J8 1336 aaKnown RBP23.92■■□□□ 1.42
CXXC1-211ENST00000589548 FMR1Q06787 632 aaKnown RBP eCLIP23.92■■□□□ 1.42
CXXC1-211ENST00000589548 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms