RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
SF3A2-204ENST00000589118 VEGFBP49765 207 aa20.41■□□□□ 0.86
SF3A2-204ENST00000589118 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
SF3A2-204ENST00000589118 CNKSR1Q969H4 720 aa20.41■□□□□ 0.86
SF3A2-204ENST00000589118 PASKQ96RG2 1323 aa20.41■□□□□ 0.86
SF3A2-204ENST00000589118 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 CNTNAP1P78357 1384 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
SF3A2-204ENST00000589118 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
SF3A2-204ENST00000589118 C7orf43Q8WVR3 580 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 MASTLQ96GX5 879 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
SF3A2-204ENST00000589118 TAF1DQ9H5J8 278 aaPredicted RBP20.4■□□□□ 0.86
SF3A2-204ENST00000589118 KIF7Q2M1P5 1343 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 PER1O15534 1290 aaPredicted RBP20.39■□□□□ 0.85
SF3A2-204ENST00000589118 ST5P78524 1137 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
SF3A2-204ENST00000589118 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 SCN4AP35499 1836 aa20.39■□□□□ 0.85
SF3A2-204ENST00000589118 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
SF3A2-204ENST00000589118 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
SF3A2-204ENST00000589118 TEX13AQ9BXU3 409 aaPredicted RBP20.38■□□□□ 0.85
SF3A2-204ENST00000589118 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
SF3A2-204ENST00000589118 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
SF3A2-204ENST00000589118 LDHDQ86WU2 507 aa20.36■□□□□ 0.85
SF3A2-204ENST00000589118 LBX1P52954 281 aa20.35■□□□□ 0.85
SF3A2-204ENST00000589118 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
SF3A2-204ENST00000589118 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
SF3A2-204ENST00000589118 NBPF5PQ86XG9 351 aaPredicted RBP20.35■□□□□ 0.85
SF3A2-204ENST00000589118 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
SF3A2-204ENST00000589118 FMR1Q06787 632 aaKnown RBP eCLIP20.34■□□□□ 0.85
SF3A2-204ENST00000589118 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
SF3A2-204ENST00000589118 SLC51AQ86UW1 340 aa20.34■□□□□ 0.85
SF3A2-204ENST00000589118 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
SF3A2-204ENST00000589118 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
SF3A2-204ENST00000589118 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
SF3A2-204ENST00000589118 GAS2L2Q8NHY3 880 aa20.33■□□□□ 0.85
SF3A2-204ENST00000589118 ADAMTSL1Q8N6G6 1762 aa20.33■□□□□ 0.84
SF3A2-204ENST00000589118 CLSPNQ9HAW4 1339 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 NPR1P16066 1061 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 EPHX2P34913 555 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
SF3A2-204ENST00000589118 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
SF3A2-204ENST00000589118 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 HACL1Q9UJ83 578 aa20.32■□□□□ 0.84
SF3A2-204ENST00000589118 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 CTCFP49711 727 aaPredicted RBP20.31■□□□□ 0.84
SF3A2-204ENST00000589118 HLFQ16534 295 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 MCM10Q7L590 875 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 AIDAQ96BJ3 306 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 WBP1LQ9NX94 342 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
SF3A2-204ENST00000589118 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
SF3A2-204ENST00000589118 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
SF3A2-204ENST00000589118 CNTROBQ8N137 903 aa20.3■□□□□ 0.84
SF3A2-204ENST00000589118 COL4A5P29400 1685 aa20.29■□□□□ 0.84
SF3A2-204ENST00000589118 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
SF3A2-204ENST00000589118 KLRG2A4D1S0 409 aaPredicted RBP20.28■□□□□ 0.84
SF3A2-204ENST00000589118 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
SF3A2-204ENST00000589118 DEFB115Q30KQ5 88 aa20.28■□□□□ 0.84
SF3A2-204ENST00000589118 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.84
SF3A2-204ENST00000589118 TPTE2Q6XPS3 522 aa20.27■□□□□ 0.84
SF3A2-204ENST00000589118 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
SF3A2-204ENST00000589118 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
SF3A2-204ENST00000589118 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
SF3A2-204ENST00000589118 GJA3Q9Y6H8 435 aa20.27■□□□□ 0.84
SF3A2-204ENST00000589118 FZD9O00144 591 aa20.26■□□□□ 0.83
SF3A2-204ENST00000589118 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
SF3A2-204ENST00000589118 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
SF3A2-204ENST00000589118 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
SF3A2-204ENST00000589118 RASSF10A6NK89 507 aa20.25■□□□□ 0.83
SF3A2-204ENST00000589118 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
SF3A2-204ENST00000589118 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
SF3A2-204ENST00000589118 GRM1Q13255 1194 aa20.25■□□□□ 0.83
SF3A2-204ENST00000589118 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
SF3A2-204ENST00000589118 RTKN2Q8IZC4 609 aa20.24■□□□□ 0.83
SF3A2-204ENST00000589118 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
SF3A2-204ENST00000589118 ABHD8Q96I13 439 aa20.24■□□□□ 0.83
SF3A2-204ENST00000589118 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
SF3A2-204ENST00000589118 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
SF3A2-204ENST00000589118 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
SF3A2-204ENST00000589118 SNED1Q8TER0 1413 aa20.22■□□□□ 0.83
SF3A2-204ENST00000589118 EPS15P42566 896 aa20.22■□□□□ 0.83
SF3A2-204ENST00000589118 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
SF3A2-204ENST00000589118 PNMA8AQ86V59 439 aaPredicted RBP20.22■□□□□ 0.83
SF3A2-204ENST00000589118 TSKSQ9UJT2 592 aa20.22■□□□□ 0.83
SF3A2-204ENST00000589118 NUP98P52948 1817 aa20.22■□□□□ 0.83
SF3A2-204ENST00000589118 TRAF5O00463 557 aa20.21■□□□□ 0.83
SF3A2-204ENST00000589118 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
SF3A2-204ENST00000589118 PAXIP1Q6ZW49 1069 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-204ENST00000589118 GPC2Q8N158 579 aa20.21■□□□□ 0.83
SF3A2-204ENST00000589118 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
SF3A2-204ENST00000589118 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms