RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CT47B1P0C2W7 299 aaPredicted RBP24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 KIF6Q6ZMV9 814 aa24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 ATF5Q9Y2D1 282 aaPredicted RBP24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 ARFGEF2Q9Y6D5 1785 aa24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 FKBP8Q14318 412 aa24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 ZBTB3Q9H5J0 574 aa24.35■■□□□ 1.49
CLPTM1-209ENST00000588855 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
CLPTM1-209ENST00000588855 G2E3Q7L622 706 aa24.34■■□□□ 1.49
CLPTM1-209ENST00000588855 SRCAPQ6ZRS2 3230 aa24.33■■□□□ 1.49
CLPTM1-209ENST00000588855 ZNF428Q96B54 188 aa24.33■■□□□ 1.49
CLPTM1-209ENST00000588855 ANKRD36CQ5JPF3 1778 aa24.32■■□□□ 1.48
CLPTM1-209ENST00000588855 HLFQ16534 295 aa24.32■■□□□ 1.48
CLPTM1-209ENST00000588855 SSH1Q8WYL5 1049 aa24.32■■□□□ 1.48
CLPTM1-209ENST00000588855 BCL2L13Q9BXK5 485 aa24.32■■□□□ 1.48
CLPTM1-209ENST00000588855 NLGN1Q8N2Q7 840 aa24.31■■□□□ 1.48
CLPTM1-209ENST00000588855 ERVV-1B6SEH8 477 aa24.3■■□□□ 1.48
CLPTM1-209ENST00000588855 ALDH1L2Q3SY69 923 aa24.3■■□□□ 1.48
CLPTM1-209ENST00000588855 SPON1Q9HCB6 807 aa24.3■■□□□ 1.48
CLPTM1-209ENST00000588855 MRPL50Q8N5N7 158 aaKnown RBP24.3■■□□□ 1.48
CLPTM1-209ENST00000588855 LRP5O75197 1615 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 FLIIQ13045 1269 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 TBC1D9BQ66K14 1250 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 SGIP1Q9BQI5 828 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 SMC4Q9NTJ3 1288 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 ZNF652Q9Y2D9 606 aa24.29■■□□□ 1.48
CLPTM1-209ENST00000588855 RGL2O15211 777 aa24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 PTGER2P43116 358 aa24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 RARSP54136 660 aaKnown RBP24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 CLEC4GQ6UXB4 293 aa24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 ANKRD13DQ6ZTN6 518 aa24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 PLBD2Q8NHP8 589 aa24.28■■□□□ 1.48
CLPTM1-209ENST00000588855 MMP10P09238 476 aa24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 NFIXQ14938 502 aa24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 GIGYF2Q6Y7W6 1299 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 BICDL1Q6ZP65 573 aa24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 AFDNP55196 1824 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
CLPTM1-209ENST00000588855 TM4SF1P30408 202 aa24.26■■□□□ 1.47
CLPTM1-209ENST00000588855 ADCY9O60503 1353 aa24.26■■□□□ 1.47
CLPTM1-209ENST00000588855 DDX58O95786 925 aaKnown RBP24.25■■□□□ 1.47
CLPTM1-209ENST00000588855 POLD1P28340 1107 aa24.25■■□□□ 1.47
CLPTM1-209ENST00000588855 DDR1Q08345 913 aa24.25■■□□□ 1.47
CLPTM1-209ENST00000588855 FKBP5Q13451 457 aaPredicted RBP24.25■■□□□ 1.47
CLPTM1-209ENST00000588855 RIC3Q7Z5B4 369 aa24.25■■□□□ 1.47
CLPTM1-209ENST00000588855 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
CLPTM1-209ENST00000588855 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
CLPTM1-209ENST00000588855 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
CLPTM1-209ENST00000588855 POLRMTO00411 1230 aaKnown RBP24.23■■□□□ 1.47
CLPTM1-209ENST00000588855 KSR2Q6VAB6 950 aa24.23■■□□□ 1.47
CLPTM1-209ENST00000588855 NIP7Q9Y221 180 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLPTM1-209ENST00000588855 MAP3K2Q9Y2U5 619 aa24.23■■□□□ 1.47
CLPTM1-209ENST00000588855 BCAR3O75815 825 aa24.22■■□□□ 1.47
CLPTM1-209ENST00000588855 GPTP24298 496 aa24.22■■□□□ 1.47
CLPTM1-209ENST00000588855 CARMIL3Q8ND23 1372 aa24.22■■□□□ 1.47
CLPTM1-209ENST00000588855 UBN2Q6ZU65 1347 aa24.22■■□□□ 1.47
CLPTM1-209ENST00000588855 TCIRG1Q13488 830 aa24.21■■□□□ 1.47
CLPTM1-209ENST00000588855 HSP90AB3PQ58FF7 597 aa24.21■■□□□ 1.47
CLPTM1-209ENST00000588855 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
CLPTM1-209ENST00000588855 PARP3Q9Y6F1 533 aa24.21■■□□□ 1.47
CLPTM1-209ENST00000588855 BRPF1P55201 1214 aaPredicted RBP24.2■■□□□ 1.47
CLPTM1-209ENST00000588855 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.47
CLPTM1-209ENST00000588855 PTPRCP08575 1304 aa24.19■■□□□ 1.46
CLPTM1-209ENST00000588855 F6X3S4 739 aa24.19■■□□□ 1.46
CLPTM1-209ENST00000588855 MYD88Q99836 296 aa24.19■■□□□ 1.46
CLPTM1-209ENST00000588855 METTL22Q9BUU2 404 aaPredicted RBP24.19■■□□□ 1.46
CLPTM1-209ENST00000588855 ATP5J2-PTCD1G3V325 749 aa24.18■■□□□ 1.46
CLPTM1-209ENST00000588855 SERPINB2P05120 415 aa24.18■■□□□ 1.46
CLPTM1-209ENST00000588855 DNAAF4Q8WXU2 420 aa24.18■■□□□ 1.46
CLPTM1-209ENST00000588855 NOB1Q9ULX3 412 aaKnown RBP24.18■■□□□ 1.46
CLPTM1-209ENST00000588855 KIF16BQ96L93 1317 aa24.18■■□□□ 1.46
CLPTM1-209ENST00000588855 FAM177BA6PVY3 158 aa24.17■■□□□ 1.46
CLPTM1-209ENST00000588855 ISCA1Q9BUE6 129 aa24.17■■□□□ 1.46
CLPTM1-209ENST00000588855 KIF13BQ9NQT8 1826 aa24.16■■□□□ 1.46
CLPTM1-209ENST00000588855 SUSD4Q5VX71 490 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 NLRP10Q86W26 655 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 N4BP2Q86UW6 1770 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 PARP10Q53GL7 1025 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 NBPF5PQ86XG9 351 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 PPP1R1BQ9UD71 204 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 ANKRD31Q8N7Z5 1873 aa24.15■■□□□ 1.46
CLPTM1-209ENST00000588855 IGKV5-2P06315 115 aa24.14■■□□□ 1.45
CLPTM1-209ENST00000588855 IBTKQ9P2D0 1353 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 NTSR2O95665 410 aa24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 NEXNQ0ZGT2 675 aa24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 PRR5LQ6MZQ0 368 aa24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 CNBD1Q8NA66 436 aa24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 FRAT1Q92837 279 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-209ENST00000588855 PXDNLA1KZ92 1463 aa24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 TRIM28Q13263 835 aaKnown RBP24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 CWF19L2Q2TBE0 894 aaKnown RBP24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 SLC4A10Q6U841 1118 aa24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 KLHL34Q8N239 644 aa24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 CCDC24Q8N4L8 307 aa24.12■■□□□ 1.45
CLPTM1-209ENST00000588855 PPP1R42Q7Z4L9 355 aa24.11■■□□□ 1.45
CLPTM1-209ENST00000588855 KIAA1551Q9HCM1 1747 aa24.11■■□□□ 1.45
CLPTM1-209ENST00000588855 NEURL1BA8MQ27 555 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 NPHP1O15259 732 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 TPTE2Q6XPS3 522 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms