RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 SPATA31A5Q5VU36 1347 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 SPATA31A7Q8IWB4 1347 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 ST18O60284 1047 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 RPGRQ92834 1020 aaKnown RBP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 HEG1Q9ULI3 1381 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 C20orf194Q5TEA3 1177 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 DDX46Q7L014 1031 aaKnown RBP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 TFCP2L1Q9NZI6 479 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 NIP7Q9Y221 180 aaKnown RBP eCLIP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 ANXA1P04083 346 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 NKX1-1Q15270 411 aaPredicted RBP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 METTL24Q5JXM2 366 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 CHD2O14647 1828 aaKnown RBP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
ZNF554-202ENST00000588534 GPTP24298 496 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 ZBTB40Q9NUA8 1239 aa9.08□□□□□ -0.96
ZNF554-202ENST00000588534 KIF20BQ96Q89 1820 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 ATP5J2-PTCD1G3V325 749 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 GNPATO15228 680 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 AACSQ86V21 672 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
ZNF554-202ENST00000588534 IQSEC2Q5JU85 1478 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 APBA3O96018 575 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 SLC5A1P13866 664 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 IL15P40933 162 aaPredicted RBP9.07□□□□□ -0.96
ZNF554-202ENST00000588534 CAVIN4Q5BKX8 364 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 FSD1Q9BTV5 496 aa9.07□□□□□ -0.96
ZNF554-202ENST00000588534 MEIS3Q99687 375 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 SH3TC1Q8TE82 1336 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 A1BGP04217 495 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 TCIRG1Q13488 830 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 SIL1Q9H173 461 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
ZNF554-202ENST00000588534 ABCC4O15439 1325 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 ZBTB7BO15156 539 aaPredicted RBP9.06□□□□□ -0.96
ZNF554-202ENST00000588534 PDIA4P13667 645 aaKnown RBP9.06□□□□□ -0.96
ZNF554-202ENST00000588534 LDHAL6AQ6ZMR3 332 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 PIGBQ92521 554 aa9.06□□□□□ -0.96
ZNF554-202ENST00000588534 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 TRDNQ13061 729 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 USP16Q9Y5T5 823 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 PHF14O94880 888 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 MX1P20591 662 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 POLD1P28340 1107 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 SLC27A3Q5K4L6 730 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 ANKRD18AQ8IVF6 992 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 EXOC6BQ9Y2D4 811 aa9.05□□□□□ -0.96
ZNF554-202ENST00000588534 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
ZNF554-202ENST00000588534 UQCRFS1P1P0C7P4 283 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 KCNQ3O43525 872 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 G2E3Q7L622 706 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 DHX37Q8IY37 1157 aaKnown RBP9.04□□□□□ -0.96
ZNF554-202ENST00000588534 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 MAP3K15Q6ZN16 1313 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 PDE8AO60658 829 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 ADRA2BP18089 450 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 GCKRQ14397 625 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 PALLDQ8WX93 1383 aa9.04□□□□□ -0.96
ZNF554-202ENST00000588534 MYOM1P52179 1685 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 FNBP4Q8N3X1 1017 aaPredicted RBP9.03□□□□□ -0.96
ZNF554-202ENST00000588534 FBXO41Q8TF61 875 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 ANO2Q9NQ90 1003 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 ECHDC1Q9NTX5 307 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 COL3A1P02461 1466 aaPredicted RBP9.03□□□□□ -0.96
ZNF554-202ENST00000588534 CEMIPQ8WUJ3 1361 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 PSMA5P28066 241 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 TTF1Q15361 905 aaPredicted RBP9.03□□□□□ -0.96
ZNF554-202ENST00000588534 CEP85Q6P2H3 762 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 ARID3AQ99856 593 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 ANKRD2Q9GZV1 360 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
ZNF554-202ENST00000588534 ABCC6O95255 1503 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
ZNF554-202ENST00000588534 CLEC4GQ6UXB4 293 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
ZNF554-202ENST00000588534 SLC3A2P08195 630 aaKnown RBP9.02□□□□□ -0.96
ZNF554-202ENST00000588534 NUCB1Q02818 461 aa9.02□□□□□ -0.96
ZNF554-202ENST00000588534 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.96
ZNF554-202ENST00000588534 SLF2Q8IX21 1173 aa9.02□□□□□ -0.96
ZNF554-202ENST00000588534 NACAP1Q9BZK3 213 aa9.02□□□□□ -0.96
ZNF554-202ENST00000588534 PXDNQ92626 1479 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 APPP05067 770 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 RLBP1P12271 317 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 SYNE3Q6ZMZ3 975 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 DNAJC2Q99543 621 aaKnown RBP9.02□□□□□ -0.97
ZNF554-202ENST00000588534 TRIM34Q9BYJ4 488 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 IL1RAPL2Q9NP60 686 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 CTNNA3Q9UI47 895 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms