RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
CIRBP-218ENST00000588344 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
CIRBP-218ENST00000588344 PARP3Q9Y6F1 533 aa11.58□□□□□ -0.56
CIRBP-218ENST00000588344 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
CIRBP-218ENST00000588344 ANXA1P04083 346 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
CIRBP-218ENST00000588344 FLIIQ13045 1269 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 FKBP8Q14318 412 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
CIRBP-218ENST00000588344 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
CIRBP-218ENST00000588344 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
CIRBP-218ENST00000588344 PTPRCP08575 1304 aa11.57□□□□□ -0.56
CIRBP-218ENST00000588344 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 TRIM28Q13263 835 aaKnown RBP11.56□□□□□ -0.56
CIRBP-218ENST00000588344 FKBP5Q13451 457 aaPredicted RBP11.56□□□□□ -0.56
CIRBP-218ENST00000588344 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
CIRBP-218ENST00000588344 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 ARHGAP45Q92619 1136 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
CIRBP-218ENST00000588344 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
CIRBP-218ENST00000588344 MMP10P09238 476 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 NEXNQ0ZGT2 675 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 HLFQ16534 295 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 TPTE2Q6XPS3 522 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 PPP1R42Q7Z4L9 355 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
CIRBP-218ENST00000588344 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
CIRBP-218ENST00000588344 PI4KAP2A4QPH2 592 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 PTGER2P43116 358 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 NFIXQ14938 502 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 TBC1D9BQ66K14 1250 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 ZNF34Q8IZ26 560 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
CIRBP-218ENST00000588344 KIF16BQ96L93 1317 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
CIRBP-218ENST00000588344 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
CIRBP-218ENST00000588344 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
CIRBP-218ENST00000588344 G2E3Q7L622 706 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
CIRBP-218ENST00000588344 PPP1R1BQ9UD71 204 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-218ENST00000588344 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 MAP3K2Q9Y2U5 619 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
CIRBP-218ENST00000588344 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 RNF123Q5XPI4 1314 aa11.53□□□□□ -0.56
CIRBP-218ENST00000588344 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
CIRBP-218ENST00000588344 NPHP1O15259 732 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 SERPINB2P05120 415 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-218ENST00000588344 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 NBPF5PQ86XG9 351 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-218ENST00000588344 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 NOB1Q9ULX3 412 aaKnown RBP11.52□□□□□ -0.57
CIRBP-218ENST00000588344 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.57
CIRBP-218ENST00000588344 MS4A1P11836 297 aa11.51□□□□□ -0.57
CIRBP-218ENST00000588344 ST5P78524 1137 aa11.51□□□□□ -0.57
CIRBP-218ENST00000588344 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
CIRBP-218ENST00000588344 TGFB2P61812 414 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 DDR1Q08345 913 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-218ENST00000588344 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 MYD88Q99836 296 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 BCL2L13Q9BXK5 485 aa11.5□□□□□ -0.57
CIRBP-218ENST00000588344 CWC25Q9NXE8 425 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-218ENST00000588344 IBTKQ9P2D0 1353 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-218ENST00000588344 ATP5J2-PTCD1G3V325 749 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 BCAR3O75815 825 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 GPTP24298 496 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 PDE6BP35913 854 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
CIRBP-218ENST00000588344 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-218ENST00000588344 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
CIRBP-218ENST00000588344 ADCY9O60503 1353 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
CIRBP-218ENST00000588344 BEND3Q5T5X7 828 aa11.48□□□□□ -0.57
CIRBP-218ENST00000588344 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
CIRBP-218ENST00000588344 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
CIRBP-218ENST00000588344 HDAC5Q9UQL6 1122 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms