RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 HMMRO75330 724 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 MEIS3Q99687 375 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 ADCY9O60503 1353 aa13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
CHMP1B-202ENST00000588284 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
CHMP1B-202ENST00000588284 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
CHMP1B-202ENST00000588284 SIK1P57059 783 aa13.14□□□□□ -0.31
CHMP1B-202ENST00000588284 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
CHMP1B-202ENST00000588284 GLI3P10071 1580 aa13.14□□□□□ -0.31
CHMP1B-202ENST00000588284 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 KCNQ2O43526 872 aa13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
CHMP1B-202ENST00000588284 C5P01031 1676 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
CHMP1B-202ENST00000588284 DOT1LQ8TEK3 1739 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 MYD88Q99836 296 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
CHMP1B-202ENST00000588284 GRM8O00222 908 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 RXRBP28702 533 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 SIRT2Q8IXJ6 389 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 UTYO14607 1347 aa13.1□□□□□ -0.31
CHMP1B-202ENST00000588284 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 GCKRQ14397 625 aa13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
CHMP1B-202ENST00000588284 A0A087WZG4 1122 aa13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 NUCB1Q02818 461 aa13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 CWF19L2Q2TBE0 894 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 ARXQ96QS3 562 aa13.08□□□□□ -0.32
CHMP1B-202ENST00000588284 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
CHMP1B-202ENST00000588284 ITPK1Q13572 414 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
CHMP1B-202ENST00000588284 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
CHMP1B-202ENST00000588284 H7C1W4 665 aa13.05□□□□□ -0.32
CHMP1B-202ENST00000588284 RGS3P49796 1198 aa13.05□□□□□ -0.32
CHMP1B-202ENST00000588284 MTX1Q13505 466 aa13.05□□□□□ -0.32
CHMP1B-202ENST00000588284 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-202ENST00000588284 RGL2O15211 777 aa13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 RAB11FIP3O75154 756 aa13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
CHMP1B-202ENST00000588284 COL15A1P39059 1388 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms