RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 NPC1L1Q9UHC9 1359 aa18.73■□□□□ 0.59
SMAD7-206ENST00000588190 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
SMAD7-206ENST00000588190 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
SMAD7-206ENST00000588190 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
SMAD7-206ENST00000588190 COL13A1Q5TAT6 717 aaPredicted RBP18.73■□□□□ 0.59
SMAD7-206ENST00000588190 PRPF40BQ6NWY9 871 aaKnown RBP18.73■□□□□ 0.59
SMAD7-206ENST00000588190 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
SMAD7-206ENST00000588190 CACNA1SQ13698 1873 aa18.73■□□□□ 0.59
SMAD7-206ENST00000588190 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
SMAD7-206ENST00000588190 STYK1Q6J9G0 422 aa18.72■□□□□ 0.59
SMAD7-206ENST00000588190 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
SMAD7-206ENST00000588190 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
SMAD7-206ENST00000588190 DDNO94850 711 aaPredicted RBP18.71■□□□□ 0.59
SMAD7-206ENST00000588190 NEFMP07197 916 aa18.71■□□□□ 0.59
SMAD7-206ENST00000588190 SOGA3Q5TF21 947 aa18.71■□□□□ 0.59
SMAD7-206ENST00000588190 NIP7Q9Y221 180 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMAD7-206ENST00000588190 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
SMAD7-206ENST00000588190 CEMIPQ8WUJ3 1361 aa18.7■□□□□ 0.58
SMAD7-206ENST00000588190 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
SMAD7-206ENST00000588190 SRGNP10124 158 aa18.7■□□□□ 0.58
SMAD7-206ENST00000588190 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
SMAD7-206ENST00000588190 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
SMAD7-206ENST00000588190 POTECB2RU33 542 aa18.69■□□□□ 0.58
SMAD7-206ENST00000588190 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
SMAD7-206ENST00000588190 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
SMAD7-206ENST00000588190 SLX4Q8IY92 1834 aa18.69■□□□□ 0.58
SMAD7-206ENST00000588190 COL11A2P13942 1736 aaPredicted RBP18.69■□□□□ 0.58
SMAD7-206ENST00000588190 HSPA1AP0DMV8 641 aaKnown RBP18.67■□□□□ 0.58
SMAD7-206ENST00000588190 HSPA1BP0DMV9 641 aaKnown RBP18.67■□□□□ 0.58
SMAD7-206ENST00000588190 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
SMAD7-206ENST00000588190 CHADLQ6NUI6 762 aa18.67■□□□□ 0.58
SMAD7-206ENST00000588190 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
SMAD7-206ENST00000588190 MKRN1Q9UHC7 482 aaKnown RBP18.67■□□□□ 0.58
SMAD7-206ENST00000588190 NPR1P16066 1061 aa18.66■□□□□ 0.58
SMAD7-206ENST00000588190 TAF7Q15545 349 aaPredicted RBP18.66■□□□□ 0.58
SMAD7-206ENST00000588190 EAPPQ56P03 285 aaPredicted RBP18.66■□□□□ 0.58
SMAD7-206ENST00000588190 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
SMAD7-206ENST00000588190 FER1L6Q2WGJ9 1857 aa18.66■□□□□ 0.58
SMAD7-206ENST00000588190 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
SMAD7-206ENST00000588190 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
SMAD7-206ENST00000588190 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
SMAD7-206ENST00000588190 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
SMAD7-206ENST00000588190 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
SMAD7-206ENST00000588190 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
SMAD7-206ENST00000588190 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
SMAD7-206ENST00000588190 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
SMAD7-206ENST00000588190 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
SMAD7-206ENST00000588190 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
SMAD7-206ENST00000588190 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
SMAD7-206ENST00000588190 HLFQ16534 295 aa18.63■□□□□ 0.57
SMAD7-206ENST00000588190 PCNTO95613 3336 aa18.62■□□□□ 0.57
SMAD7-206ENST00000588190 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
SMAD7-206ENST00000588190 BCORQ6W2J9 1755 aa18.62■□□□□ 0.57
SMAD7-206ENST00000588190 MYL6BP14649 208 aa18.61■□□□□ 0.57
SMAD7-206ENST00000588190 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
SMAD7-206ENST00000588190 FKBP4Q02790 459 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMAD7-206ENST00000588190 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
SMAD7-206ENST00000588190 RTKN2Q8IZC4 609 aa18.61■□□□□ 0.57
SMAD7-206ENST00000588190 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
SMAD7-206ENST00000588190 NUTM1Q86Y26 1132 aa18.6■□□□□ 0.57
SMAD7-206ENST00000588190 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
SMAD7-206ENST00000588190 GPTP24298 496 aa18.59■□□□□ 0.57
SMAD7-206ENST00000588190 LDHDQ86WU2 507 aa18.59■□□□□ 0.57
SMAD7-206ENST00000588190 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
SMAD7-206ENST00000588190 C7orf43Q8WVR3 580 aa18.59■□□□□ 0.57
SMAD7-206ENST00000588190 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
SMAD7-206ENST00000588190 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
SMAD7-206ENST00000588190 TAF1DQ9H5J8 278 aaPredicted RBP18.59■□□□□ 0.57
SMAD7-206ENST00000588190 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.57
SMAD7-206ENST00000588190 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
SMAD7-206ENST00000588190 JDP2Q8WYK2 163 aa18.58■□□□□ 0.56
SMAD7-206ENST00000588190 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
SMAD7-206ENST00000588190 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
SMAD7-206ENST00000588190 HACL1Q9UJ83 578 aa18.58■□□□□ 0.56
SMAD7-206ENST00000588190 GJA3Q9Y6H8 435 aa18.58■□□□□ 0.56
SMAD7-206ENST00000588190 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
SMAD7-206ENST00000588190 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
SMAD7-206ENST00000588190 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
SMAD7-206ENST00000588190 EPHX2P34913 555 aa18.56■□□□□ 0.56
SMAD7-206ENST00000588190 TTLL7Q6ZT98 887 aa18.56■□□□□ 0.56
SMAD7-206ENST00000588190 RNF123Q5XPI4 1314 aa18.55■□□□□ 0.56
SMAD7-206ENST00000588190 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
SMAD7-206ENST00000588190 TMX4Q9H1E5 349 aaPredicted RBP18.55■□□□□ 0.56
SMAD7-206ENST00000588190 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
SMAD7-206ENST00000588190 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
SMAD7-206ENST00000588190 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
SMAD7-206ENST00000588190 EIF6P56537 245 aaKnown RBP18.54■□□□□ 0.56
SMAD7-206ENST00000588190 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
SMAD7-206ENST00000588190 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
SMAD7-206ENST00000588190 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
SMAD7-206ENST00000588190 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
SMAD7-206ENST00000588190 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
SMAD7-206ENST00000588190 SCN4AP35499 1836 aa18.52■□□□□ 0.56
SMAD7-206ENST00000588190 ERVV-1B6SEH8 477 aa18.52■□□□□ 0.56
SMAD7-206ENST00000588190 RGL2O15211 777 aa18.52■□□□□ 0.56
SMAD7-206ENST00000588190 LMOD1P29536 600 aaPredicted RBP18.52■□□□□ 0.56
SMAD7-206ENST00000588190 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
SMAD7-206ENST00000588190 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
SMAD7-206ENST00000588190 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
SMAD7-206ENST00000588190 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms