RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
RDH13-209ENST00000587721 RGL2O15211 777 aa18.25■□□□□ 0.51
RDH13-209ENST00000587721 TPTE2Q6XPS3 522 aa18.25■□□□□ 0.51
RDH13-209ENST00000587721 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
RDH13-209ENST00000587721 SRGNP10124 158 aa18.24■□□□□ 0.51
RDH13-209ENST00000587721 PRELPP51888 382 aa18.24■□□□□ 0.51
RDH13-209ENST00000587721 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
RDH13-209ENST00000587721 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
RDH13-209ENST00000587721 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
RDH13-209ENST00000587721 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
RDH13-209ENST00000587721 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
RDH13-209ENST00000587721 CEP350Q5VT06 3117 aa18.23■□□□□ 0.51
RDH13-209ENST00000587721 LTBP3Q9NS15 1303 aa18.23■□□□□ 0.51
RDH13-209ENST00000587721 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
RDH13-209ENST00000587721 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
RDH13-209ENST00000587721 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
RDH13-209ENST00000587721 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
RDH13-209ENST00000587721 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
RDH13-209ENST00000587721 NPR1P16066 1061 aa18.2■□□□□ 0.5
RDH13-209ENST00000587721 HTRA3P83110 453 aa18.2■□□□□ 0.5
RDH13-209ENST00000587721 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
RDH13-209ENST00000587721 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
RDH13-209ENST00000587721 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
RDH13-209ENST00000587721 JMYQ8N9B5 988 aa18.19■□□□□ 0.5
RDH13-209ENST00000587721 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
RDH13-209ENST00000587721 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
RDH13-209ENST00000587721 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
RDH13-209ENST00000587721 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
RDH13-209ENST00000587721 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
RDH13-209ENST00000587721 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
RDH13-209ENST00000587721 TIAM2Q8IVF5 1701 aa18.16■□□□□ 0.5
RDH13-209ENST00000587721 KLRG2A4D1S0 409 aaPredicted RBP18.16■□□□□ 0.5
RDH13-209ENST00000587721 FAM177BA6PVY3 158 aa18.16■□□□□ 0.5
RDH13-209ENST00000587721 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
RDH13-209ENST00000587721 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
RDH13-209ENST00000587721 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
RDH13-209ENST00000587721 POTECB2RU33 542 aa18.15■□□□□ 0.5
RDH13-209ENST00000587721 ERVV-1B6SEH8 477 aa18.15■□□□□ 0.5
RDH13-209ENST00000587721 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
RDH13-209ENST00000587721 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
RDH13-209ENST00000587721 COL11A2P13942 1736 aaPredicted RBP18.15■□□□□ 0.5
RDH13-209ENST00000587721 DDNO94850 711 aaPredicted RBP18.14■□□□□ 0.49
RDH13-209ENST00000587721 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
RDH13-209ENST00000587721 C7orf43Q8WVR3 580 aa18.14■□□□□ 0.49
RDH13-209ENST00000587721 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
RDH13-209ENST00000587721 HLFQ16534 295 aa18.13■□□□□ 0.49
RDH13-209ENST00000587721 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
RDH13-209ENST00000587721 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
RDH13-209ENST00000587721 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
RDH13-209ENST00000587721 FER1L6Q2WGJ9 1857 aa18.13■□□□□ 0.49
RDH13-209ENST00000587721 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
RDH13-209ENST00000587721 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
RDH13-209ENST00000587721 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
RDH13-209ENST00000587721 MAP3K15Q6ZN16 1313 aa18.11■□□□□ 0.49
RDH13-209ENST00000587721 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
RDH13-209ENST00000587721 MYL6BP14649 208 aa18.1■□□□□ 0.49
RDH13-209ENST00000587721 CC2D2BQ6DHV5 1058 aa18.1■□□□□ 0.49
RDH13-209ENST00000587721 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
RDH13-209ENST00000587721 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
RDH13-209ENST00000587721 RPGRQ92834 1020 aaKnown RBP18.09■□□□□ 0.49
RDH13-209ENST00000587721 L3MBTL3Q96JM7 780 aaPredicted RBP18.09■□□□□ 0.49
RDH13-209ENST00000587721 ZNF277Q9NRM2 450 aaPredicted RBP18.09■□□□□ 0.49
RDH13-209ENST00000587721 RALBP1Q15311 655 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 JDP2Q8WYK2 163 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
RDH13-209ENST00000587721 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
RDH13-209ENST00000587721 CREBZFQ9NS37 354 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
RDH13-209ENST00000587721 IARSP41252 1262 aaKnown RBP18.07■□□□□ 0.48
RDH13-209ENST00000587721 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
RDH13-209ENST00000587721 PPP1R42Q7Z4L9 355 aa18.07■□□□□ 0.48
RDH13-209ENST00000587721 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
RDH13-209ENST00000587721 ZBTB3Q9H5J0 574 aa18.07■□□□□ 0.48
RDH13-209ENST00000587721 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
RDH13-209ENST00000587721 IBTKQ9P2D0 1353 aaPredicted RBP18.06■□□□□ 0.48
RDH13-209ENST00000587721 GPTP24298 496 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 RIPK4P57078 832 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 TTLL7Q6ZT98 887 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
RDH13-209ENST00000587721 PSMD1Q99460 953 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
RDH13-209ENST00000587721 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 HACL1Q9UJ83 578 aa18.06■□□□□ 0.48
RDH13-209ENST00000587721 CACNA1SQ13698 1873 aa18.05■□□□□ 0.48
RDH13-209ENST00000587721 HOXA10P31260 410 aaPredicted RBP18.05■□□□□ 0.48
RDH13-209ENST00000587721 PARP10Q53GL7 1025 aa18.05■□□□□ 0.48
RDH13-209ENST00000587721 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
RDH13-209ENST00000587721 GIGYF2Q6Y7W6 1299 aaKnown RBP18.05■□□□□ 0.48
RDH13-209ENST00000587721 PNMA8AQ86V59 439 aaPredicted RBP18.05■□□□□ 0.48
RDH13-209ENST00000587721 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
RDH13-209ENST00000587721 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
RDH13-209ENST00000587721 SUSD4Q5VX71 490 aa18.04■□□□□ 0.48
RDH13-209ENST00000587721 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
RDH13-209ENST00000587721 GPC2Q8N158 579 aa18.04■□□□□ 0.48
RDH13-209ENST00000587721 CLEC11AQ9Y240 323 aa18.04■□□□□ 0.48
RDH13-209ENST00000587721 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms