RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 MCM10Q7L590 875 aa20.32■□□□□ 0.84
MBD1-215ENST00000586884 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
MBD1-215ENST00000586884 COL11A2P13942 1736 aaPredicted RBP20.32■□□□□ 0.84
MBD1-215ENST00000586884 RGL2O15211 777 aa20.31■□□□□ 0.84
MBD1-215ENST00000586884 DPY19L2Q6NUT2 758 aa20.31■□□□□ 0.84
MBD1-215ENST00000586884 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 SRGNP10124 158 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 JMYQ8N9B5 988 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
MBD1-215ENST00000586884 ZNF219Q9P2Y4 722 aaPredicted RBP20.3■□□□□ 0.84
MBD1-215ENST00000586884 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
MBD1-215ENST00000586884 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
MBD1-215ENST00000586884 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
MBD1-215ENST00000586884 MASTLQ96GX5 879 aa20.29■□□□□ 0.84
MBD1-215ENST00000586884 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
MBD1-215ENST00000586884 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
MBD1-215ENST00000586884 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
MBD1-215ENST00000586884 POTECB2RU33 542 aa20.26■□□□□ 0.83
MBD1-215ENST00000586884 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
MBD1-215ENST00000586884 NEFMP07197 916 aa20.25■□□□□ 0.83
MBD1-215ENST00000586884 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
MBD1-215ENST00000586884 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
MBD1-215ENST00000586884 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
MBD1-215ENST00000586884 KLRG2A4D1S0 409 aaPredicted RBP20.24■□□□□ 0.83
MBD1-215ENST00000586884 NPR1P16066 1061 aa20.24■□□□□ 0.83
MBD1-215ENST00000586884 NIP7Q9Y221 180 aaKnown RBP eCLIP20.24■□□□□ 0.83
MBD1-215ENST00000586884 CCDC88AQ3V6T2 1871 aa20.24■□□□□ 0.83
MBD1-215ENST00000586884 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
MBD1-215ENST00000586884 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
MBD1-215ENST00000586884 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
MBD1-215ENST00000586884 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
MBD1-215ENST00000586884 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
MBD1-215ENST00000586884 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
MBD1-215ENST00000586884 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
MBD1-215ENST00000586884 LAMB4A4D0S4 1761 aa20.19■□□□□ 0.82
MBD1-215ENST00000586884 DDNO94850 711 aaPredicted RBP20.19■□□□□ 0.82
MBD1-215ENST00000586884 IQCA1LA6NCM1 817 aa20.18■□□□□ 0.82
MBD1-215ENST00000586884 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
MBD1-215ENST00000586884 HLFQ16534 295 aa20.18■□□□□ 0.82
MBD1-215ENST00000586884 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
MBD1-215ENST00000586884 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 ERVV-1B6SEH8 477 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
MBD1-215ENST00000586884 ALDH1B1P30837 517 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 L3MBTL3Q96JM7 780 aaPredicted RBP20.17■□□□□ 0.82
MBD1-215ENST00000586884 PLEKHF1Q96S99 279 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
MBD1-215ENST00000586884 NFE2L2Q16236 605 aa20.16■□□□□ 0.82
MBD1-215ENST00000586884 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
MBD1-215ENST00000586884 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
MBD1-215ENST00000586884 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
MBD1-215ENST00000586884 KIF6Q6ZMV9 814 aa20.15■□□□□ 0.82
MBD1-215ENST00000586884 MAP3K15Q6ZN16 1313 aa20.15■□□□□ 0.82
MBD1-215ENST00000586884 CRY2Q49AN0 593 aa20.14■□□□□ 0.81
MBD1-215ENST00000586884 COL13A1Q5TAT6 717 aaPredicted RBP20.14■□□□□ 0.81
MBD1-215ENST00000586884 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
MBD1-215ENST00000586884 IBTKQ9P2D0 1353 aaPredicted RBP20.13■□□□□ 0.81
MBD1-215ENST00000586884 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
MBD1-215ENST00000586884 POTEIP0CG38 1075 aa20.13■□□□□ 0.81
MBD1-215ENST00000586884 POTEJP0CG39 1038 aa20.13■□□□□ 0.81
MBD1-215ENST00000586884 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
MBD1-215ENST00000586884 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
MBD1-215ENST00000586884 RIC1Q4ADV7 1423 aa20.12■□□□□ 0.81
MBD1-215ENST00000586884 ABCC12Q96J65 1359 aa20.12■□□□□ 0.81
MBD1-215ENST00000586884 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
MBD1-215ENST00000586884 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
MBD1-215ENST00000586884 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
MBD1-215ENST00000586884 TAF1DQ9H5J8 278 aaPredicted RBP20.12■□□□□ 0.81
MBD1-215ENST00000586884 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
MBD1-215ENST00000586884 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
MBD1-215ENST00000586884 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
MBD1-215ENST00000586884 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
MBD1-215ENST00000586884 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
MBD1-215ENST00000586884 DLG5Q8TDM6 1919 aa20.11■□□□□ 0.81
MBD1-215ENST00000586884 PCNTO95613 3336 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 HSPA1AP0DMV8 641 aaKnown RBP20.1■□□□□ 0.81
MBD1-215ENST00000586884 HSPA1BP0DMV9 641 aaKnown RBP20.1■□□□□ 0.81
MBD1-215ENST00000586884 MYL6BP14649 208 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
MBD1-215ENST00000586884 NUTM1Q86Y26 1132 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 PSMD1Q99460 953 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 SCN4AP35499 1836 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
MBD1-215ENST00000586884 SYNE4Q8N205 404 aa20.09■□□□□ 0.81
MBD1-215ENST00000586884 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
MBD1-215ENST00000586884 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
MBD1-215ENST00000586884 HACL1Q9UJ83 578 aa20.09■□□□□ 0.81
MBD1-215ENST00000586884 UBN2Q6ZU65 1347 aa20.08■□□□□ 0.81
MBD1-215ENST00000586884 PASKQ96RG2 1323 aa20.08■□□□□ 0.81
MBD1-215ENST00000586884 FZD9O00144 591 aa20.08■□□□□ 0.81
MBD1-215ENST00000586884 GPTP24298 496 aa20.08■□□□□ 0.81
MBD1-215ENST00000586884 HOXA10P31260 410 aaPredicted RBP20.08■□□□□ 0.81
MBD1-215ENST00000586884 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
MBD1-215ENST00000586884 ZNF34Q8IZ26 560 aa20.07■□□□□ 0.8
MBD1-215ENST00000586884 GPC2Q8N158 579 aa20.07■□□□□ 0.8
MBD1-215ENST00000586884 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms